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PI0000515 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000515
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr06:22412343..22413906
RNA-Seq ExpressionPI0000515
SyntenyPI0000515
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033326.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.6e-3272.9Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTVLDGRWIESSRYI+YRV  VYVP+SSSFQ  + CIQ R+F +S L VS LTVYW+G NNSNLI+IV+DK +SWLMLV+SK  DNDLLVVVD 
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSAGVAG
        VSA   G
Subjt:  VSAGVAG

KAA0038035.1 uncharacterized protein E6C27_scaffold36G002340 [Cucumis melo var. makuwa]6.1e-3269.44Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTV DGRWIESSRYI+Y + DVYVP+SSSFQ F+ CIQ RLF +  + VSRLTVYW   NNSNLIQIV DKD SW+MLV+SK  DNDLL+VVD+
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSAGVAGT
        V A   G+
Subjt:  VSAGVAGT

KAA0042312.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.3e-2969.9Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTVLDGRWIES RYI+Y + DVYV +SSSFQ F  CIQ RLF +S++ VSRLTVYW G NN  LIQIV+DKD+SW+MLVLSK  +NDLL+VVD+
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSA
          A
Subjt:  VSA

KAA0047392.1 uncharacterized protein E6C27_scaffold754G00490 [Cucumis melo var. makuwa]6.1e-3271.84Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTV DGRWIES RYI+YR+ DVYVP+SSSFQ F  CIQ RLF +S + VSRLTVYW   NNSNLI+IV+DKD+SW+MLV+SK  DNDLLVVV++
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSA
        V A
Subjt:  VSA

TYK14069.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]6.1e-3271.84Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTV DGRWIES RYI+YR+ DVYVP+SSSFQ F  CIQ RLF +S + VSRLTVYW   NNSNLI+IV+DKD+SW+MLV+SK  DNDLLVVV++
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSA
        V A
Subjt:  VSA

TrEMBL top hitse value%identityAlignment
A0A5A7TFW2 Protein FAR-RED ELONGATED HYPOCOTYL 3-like6.2e-3069.9Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTVLDGRWIES RYI+Y + DVYV +SSSFQ F  CIQ RLF +S++ VSRLTVYW G NN  LIQIV+DKD+SW+MLVLSK  +NDLL+VVD+
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSA
          A
Subjt:  VSA

A0A5A7TVA6 Uncharacterized protein3.0e-3271.84Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTV DGRWIES RYI+YR+ DVYVP+SSSFQ F  CIQ RLF +S + VSRLTVYW   NNSNLI+IV+DKD+SW+MLV+SK  DNDLLVVV++
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSA
        V A
Subjt:  VSA

A0A5D3CUZ6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like3.0e-3271.84Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTV DGRWIES RYI+YR+ DVYVP+SSSFQ F  CIQ RLF +S + VSRLTVYW   NNSNLI+IV+DKD+SW+MLV+SK  DNDLLVVV++
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSA
        V A
Subjt:  VSA

A0A5D3DAG3 ZnF_PMZ domain-containing protein3.0e-3269.44Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTV DGRWIESSRYI+Y + DVYVP+SSSFQ F+ CIQ RLF +  + VSRLTVYW   NNSNLIQIV DKD SW+MLV+SK  DNDLL+VVD+
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSAGVAGT
        V A   G+
Subjt:  VSAGVAGT

A0A5D3DDR3 MuDRA-like transposase7.8e-3372.9Show/hide
Query:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS
        M LQRVKTVLDGRWIESSRYI+YRV  VYVP+SSSFQ  + CIQ R+F +S L VS LTVYW+G NNSNLI+IV+DK +SWLMLV+SK  DNDLLVVVD 
Subjt:  MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDS

Query:  VSAGVAG
        VSA   G
Subjt:  VSAGVAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTACAACGAGTAAAGACTGTTTTAGATGGTAGATGGATTGAATCTTCCCGGTATATCAATTATCGTGTTGCTGATGTTTATGTTCCACTTTCATCTTCGTTTCA
AGGATTTTTAGAATGTATTCAAAGTAGACTTTTTTCATCTTCAAATCTTTATGTTTCTCGTTTGACCGTTTATTGGGATGGTTACAACAATTCCAACCTCATTCAGATTG
TTGAGGATAAGGATATGTCTTGGCTTATGTTAGTGTTGTCGAAGGTTCTTGATAATGATTTGCTTGTAGTTGTTGACTCTGTATCGGCTGGGGTTGCTGGAACATTCATT
TTGGAGCTAATTTGGGCTGTTATCGAGTCATACGACGTCAGCAAAGGAAAACCAAAAAGACTCGTAGCAATTGAAAATGCAAAAGAAGCCAAAAGGTCTTCTGCCTTACA
GCGTCGTGATGCTCCACGGCGCCTCGCGCGGCGCTGCAAGGCTAGAGGTTTTAATTCGAGCAAAAAGCCAAGCATCGCGGCTCTACCCTTGGGTGTTGTGGTGCTCCGAA
GTTTGACGAAACGTGAACGCACACGTGATGCTTGGGCGTCGCGACGCTGCCATGTTTTTGGGCTTAAATGCCCTAGTCGCCAACTTTTGAGGGATATCATTACACACTCA
ATTTTAGGCATTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTACAACGAGTAAAGACTGTTTTAGATGGTAGATGGATTGAATCTTCCCGGTATATCAATTATCGTGTTGCTGATGTTTATGTTCCACTTTCATCTTCGTTTCA
AGGATTTTTAGAATGTATTCAAAGTAGACTTTTTTCATCTTCAAATCTTTATGTTTCTCGTTTGACCGTTTATTGGGATGGTTACAACAATTCCAACCTCATTCAGATTG
TTGAGGATAAGGATATGTCTTGGCTTATGTTAGTGTTGTCGAAGGTTCTTGATAATGATTTGCTTGTAGTTGTTGACTCTGTATCGGCTGGGGTTGCTGGAACATTCATT
TTGGAGCTAATTTGGGCTGTTATCGAGTCATACGACGTCAGCAAAGGAAAACCAAAAAGACTCGTAGCAATTGAAAATGCAAAAGAAGCCAAAAGGTCTTCTGCCTTACA
GCGTCGTGATGCTCCACGGCGCCTCGCGCGGCGCTGCAAGGCTAGAGGTTTTAATTCGAGCAAAAAGCCAAGCATCGCGGCTCTACCCTTGGGTGTTGTGGTGCTCCGAA
GTTTGACGAAACGTGAACGCACACGTGATGCTTGGGCGTCGCGACGCTGCCATGTTTTTGGGCTTAAATGCCCTAGTCGCCAACTTTTGAGGGATATCATTACACACTCA
ATTTTAGGCATTCTTTAG
Protein sequenceShow/hide protein sequence
MDLQRVKTVLDGRWIESSRYINYRVADVYVPLSSSFQGFLECIQSRLFSSSNLYVSRLTVYWDGYNNSNLIQIVEDKDMSWLMLVLSKVLDNDLLVVVDSVSAGVAGTFI
LELIWAVIESYDVSKGKPKRLVAIENAKEAKRSSALQRRDAPRRLARRCKARGFNSSKKPSIAALPLGVVVLRSLTKRERTRDAWASRRCHVFGLKCPSRQLLRDIITHS
ILGIL