CuGenDBv2

Gene ID	PI0000562
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	tig00003741:24690..25166
RNA-Seq Expression	PI0000562
Synteny	PI0000562
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QHB75966.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo]

4.1e-91

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_004841786.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo]

3.5e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_009004047.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis hystrix]

7.7e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGI YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

5.9e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_009525189.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa]

7.7e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU07 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.7e-90

98.73

Show/hide

Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A249RXS5 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.7e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A249RZ69 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.7e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A286NFY1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.7e-90

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A6B9M019 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.0e-91

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

SwissProt top hits

e value

%identity

Alignment

A0A338 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.0e-89

92.41

Show/hide

Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS+WLVKHGL+HRSLGFDYQGIETLQIKSE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVF +R NPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKS DF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDY+APNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.3e-89

94.3

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG+LS WLVKHGLVHRSLGFDYQGIETLQIK E+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Q09G43 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.8e-89

93.67

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKSE+WHSIAVI YVYGYNYLRSQCAYDVAPGGLLASVYHLTRI+YG+DQPEEVCIKVFAAR NPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FW+WKSADF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Q0ZJ17 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.1e-89

94.3

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIK E+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.0e-92

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIK EEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGI YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

8.0e-85

88.61

Show/hide

Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV
        MQG LS WL K GLVHRSLGFDYQGIETLQIK E+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG++Q EEVCIKVF  R NPRIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKS DF ERESYDMLGI+YD+HPRLKRILMPESW+GWPLRKDYIAPNFYEIQDA+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

ATMG00070.1 NADH dehydrogenase subunit 9

1.1e-06

32.29

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Query:  GIDQPE-----EVCIKVFAARIN------------PRIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQ
        G+D P      EV   + + R N             RI  V  ++ SA   ERE +DM G+S+ NHP L+RI     + G PLRKD     + +++
Subjt:  GIDQPE-----EVCIKVFAARIN------------PRIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGGGTAATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGTCCGAGGAATGGCA
TTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATTTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAA
TCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAGAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCA
GAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATAT
TGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

mRNA sequence

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Protein sequence

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MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKSEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPRIPSVFWVWKSADFP
ERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

PI0000562 (gene) of Melon (PI 482460) v1 genome