CuGenDBv2

Gene ID	PI0000564
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Transcription initiation factor TFIID subunit 11-like
Genome location	chr09:9627246..9628350
RNA-Seq Expression	PI0000564
Synteny	PI0000564
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0066209.1 acidic repeat-containing protein [Cucumis melo var. makuwa]

2.2e-86

91.5

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR EEVAFDAKRKPADSCFQPKEE SNKIQKLEVVEGEESCNYVKN   NGDH GSDEQIDN+SSTV+EGKDDD VDGA LDAGD EEDYEDEDD
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

XP_004150738.1 nucleolin [Cucumis sativus]

5.9e-87

91.5

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR+EEVAFDAKRKP DSCFQPKEERSNKIQKLEVVEGEESCNYV N   NGDH GSDEQ+DNISSTV+EGK DD VDGA LDAGD EEDYEDEDD
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSS KVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

XP_008441603.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo]

5.7e-82

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR+EEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YVKN   NGDH GSDE+IDN+SSTV+EGKDDD VDGA LDA D EEDYEDE+D
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS+LDS ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

XP_008463121.1 PREDICTED: acidic repeat-containing protein [Cucumis melo]

7.2e-85

90.59

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR EEVAFDAKRKPADSCFQPKEE SNKIQKLEVVEGEESCNYVKN   NGDH GSDEQIDN+SSTV+EGKDDD VDGA LDAGD EEDYEDEDD
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDS
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEE  DDDDDEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDD+DSSDS
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDS

Query:  DA
        DA
Subjt:  DA

XP_038906649.1 pheromone-processing carboxypeptidase KEX1 [Benincasa hispida]

1.1e-72

82.59

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKNNGD----HNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDED
        MAE T   EEVAFDAKRKPAD C + KEERSNK+QKLEVVEGEESCN VK NG+    H  +DE IDN+SS+V EGKDDD V GA LDAGD  ED EDED
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKNNGD----HNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDED

Query:  DSEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSD
        DSE+ EKSSGK AEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDLGNDD+DSSDSD
Subjt:  DSEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSD

Query:  A
        A
Subjt:  A

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMR8 Uncharacterized protein

2.8e-87

91.5

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR+EEVAFDAKRKP DSCFQPKEERSNKIQKLEVVEGEESCNYV N   NGDH GSDEQ+DNISSTV+EGK DD VDGA LDAGD EEDYEDEDD
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSS KVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

A0A1S3B3S7 transcription initiation factor TFIID subunit 11-like

2.7e-82

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR+EEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YVKN   NGDH GSDE+IDN+SSTV+EGKDDD VDGA LDA D EEDYEDE+D
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS+LDS ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

A0A1S3CIW7 acidic repeat-containing protein

3.5e-85

90.59

Show/hide

Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR EEVAFDAKRKPADSCFQPKEE SNKIQKLEVVEGEESCNYVKN   NGDH GSDEQIDN+SSTV+EGKDDD VDGA LDAGD EEDYEDEDD
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDS
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEE  DDDDDEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDD+DSSDS
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEE--DDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDS

Query:  DA
        DA
Subjt:  DA

A0A5D3B8T5 Transcription initiation factor TFIID subunit 11-like

2.7e-82

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Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR+EEVAFD KRKP DSCFQPK+ERSNKIQKLEVV GEESC+YVKN   NGDH GSDE+IDN+SSTV+EGKDDD VDGA LDA D EEDYEDE+D
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEEDDD+DEDSSDDGS+LDS ESDLSDDPLAEVDLDNILPSRTRRRTVHPGVY+ TDL NDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

A0A5D3E1E7 Acidic repeat-containing protein

1.1e-86

91.5

Show/hide

Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD
        MAEITNR EEVAFDAKRKPADSCFQPKEE SNKIQKLEVVEGEESCNYVKN   NGDH GSDEQIDN+SSTV+EGKDDD VDGA LDAGD EEDYEDEDD
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKN---NGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDD

Query:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA
        SEDDEKSSGKVA DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGS+LDS+ESDLSDDPLAEVDLDNILPSRTRRR VHPGVYFATDL NDD+DSSDSDA
Subjt:  SEDDEKSSGKVAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12830.1 unknown protein

7.5e-24

42.2

Show/hide

Query:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKNNGDHNGSDEQIDNIS----------STVVEGKDDDRVDGAGLDAGDVEE
        MA++ N+ ++ +F  KRK +D   Q ++  +NK QKL       S +    +G+ NGS  QI+N++          S+V+  K  + V+   +     EE
Subjt:  MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKNNGDHNGSDEQIDNIS----------STVVEGKDDDRVDGAGLDAGDVEE

Query:  DYEDEDDSEDDEKSSGKVAE--DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSE----LDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATD
        + EDE+D E+D++   +  E  DRKGKGI ++DKGKGK+IE ++ DDED SDD  +     +  ESD SDDPLAEVDLDNILPSRTRRR+  PGV+   +
Subjt:  DYEDEDDSEDDEKSSGKVAE--DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSE----LDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATD

Query:  LGN-----DDEDSSDSDA
          N     +D++SSDSDA
Subjt:  LGN-----DDEDSSDSDA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGAAATTACCAATAGAGACGAGGAGGTCGCATTTGATGCGAAGCGCAAACCTGCTGATTCTTGCTTTCAACCCAAAGAGGAGCGTTCGAACAAAATTCAGAAGCT
CGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGGTGACCATAACGGAAGTGATGAACAGATTGATAATATTTCTTCTACGGTTGTGGAAGGGAAGG
ATGACGATCGAGTTGATGGAGCTGGTTTAGATGCGGGAGATGTGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGATGAAAAATCGAGTGGGAAAGTGGCTGAG
GATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGATGACGACGATGAGGATTCCAGTGATGATGGAAGCGAATTGGATTC
TCAAGAGAGTGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATTCTTCCTTCAAGGACGAGGAGGCGAACGGTTCACCCTGGAGTTTATTTCGCTACGG
ATCTGGGGAACGACGACGAAGATAGCAGTGATAGCGATGCTTGA

mRNA sequence

Show/hide mRNA sequence

TGAAACTGGAAAATTATGAAGTTATGTTCGTCGATTGATTCTTGTGTAGAGTTTCTTCTTCAAAACCCTAATTTTTGTTTCTTCCATTGATTCAACAATTAGGTTTCGAA
GCTTTAATTATAGGGTTTTGCGCCACATTAATGGCGGAAATTACCAATAGAGACGAGGAGGTCGCATTTGATGCGAAGCGCAAACCTGCTGATTCTTGCTTTCAACCCAA
AGAGGAGCGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGGTGACCATAACGGAAGTGATGAACAGATTGATA
ATATTTCTTCTACGGTTGTGGAAGGGAAGGATGACGATCGAGTTGATGGAGCTGGTTTAGATGCGGGAGATGTGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGAT
GATGAAAAATCGAGTGGGAAAGTGGCTGAGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGATGACGACGATGAGGA
TTCCAGTGATGATGGAAGCGAATTGGATTCTCAAGAGAGTGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATTCTTCCTTCAAGGACGAGGAGGCGAA
CGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGGGAACGACGACGAAGATAGCAGTGATAGCGATGCTTGAAACGTTTAAGAAGGTCAGTAAAATTCGGCAATCGAA
CCTTGGAGTTAGTACAAGTGATATGAGTTGATGTTTCTCAGTTGTTTATCTTCTTTTTGGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTGATTTTGAAGGT
TACATGTTTTCTTGTGTTCCCACTTTGATATCGGTAGCATTGAGGATTGCTTGCATCTATGGCTTTCTTTAATATGCCTTTTTCTTAGAAGTTTTTCTTTGTAGGGGGAT
TGTACTCATCAATCTTAATTGTAAGCCAAAATTAATGGATATCAATGGAGTTTGTAACATTTGATTCTTCACTTATTGGATATGTTAGTGATGCCAATACTCTTGCACAT
TGAAA

Protein sequence

Show/hide protein sequence

MAEITNRDEEVAFDAKRKPADSCFQPKEERSNKIQKLEVVEGEESCNYVKNNGDHNGSDEQIDNISSTVVEGKDDDRVDGAGLDAGDVEEDYEDEDDSEDDEKSSGKVAE
DRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSQESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNDDEDSSDSDA

PI0000564 (gene) of Melon (PI 482460) v1 genome