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PI0000585 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000585
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Genome locationchr09:16694270..16694644
RNA-Seq ExpressionPI0000585
SyntenyPI0000585
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038266.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.2e-1457.97Show/hide
Query:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        SKFKKV++ VF+GT  DSWLFRA RYF IH   D E+LT+A+I+F+  TLDW R++EE + FT W+ +K
Subjt:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

KAA0043037.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.2e-1457.97Show/hide
Query:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        SKFKKV++ VF+GT  DSWLFRA RYF IH   D E+LT+A+I+F+  TLDW R++EE + FT W+ +K
Subjt:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

KAA0045135.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]3.2e-1456.34Show/hide
Query:  NCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        N SKFKKVK+ +FNG   DSWLFRA RYF IH   +LEK+++AII+F+  TLDW R+++E + F SW+ +K
Subjt:  NCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

KAA0057269.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]9.3e-1456.94Show/hide
Query:  MNCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        M+ SKFKKV++ VF GT  DSWLFRA RYF IH   D EKLT+A+I+F+  TLDW R++EE + F  W  +K
Subjt:  MNCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

KAA0058186.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]7.1e-1457.97Show/hide
Query:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        SKFKKV++ VF+GT  DSWLFRA RYF IH   D EKLT+A+I+F+   LDW R++EE + FT W+ +K
Subjt:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

TrEMBL top hitse value%identityAlignment
A0A5A7T7R9 Ty3/gypsy retrotransposon protein2.0e-1457.97Show/hide
Query:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        SKFKKV++ VF+GT  DSWLFRA RYF IH   D E+LT+A+I+F+  TLDW R++EE + FT W+ +K
Subjt:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

A0A5A7TML6 Ty3/gypsy retrotransposon protein2.0e-1457.97Show/hide
Query:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        SKFKKV++ VF+GT  DSWLFRA RYF IH   D E+LT+A+I+F+  TLDW R++EE + FT W+ +K
Subjt:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

A0A5A7UVI2 Ty3/gypsy retrotransposon protein3.4e-1457.97Show/hide
Query:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        SKFKKV++ VF+GT  DSWLFRA RYF IH   D EKLT+A+I+F+   LDW R++EE + FT W+ +K
Subjt:  SKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

A0A5D3DJ67 Transposon Tf2-1 polyprotein isoform X11.5e-1456.34Show/hide
Query:  NCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        N SKFKKVK+ +FNG   DSWLFRA RYF IH   +LEK+++AII+F+  TLDW R+++E + F SW+ +K
Subjt:  NCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

A0A5D3DWG6 Transposon Tf2-1 polyprotein isoform X14.5e-1456.94Show/hide
Query:  MNCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK
        M+ SKFKKV++ VF GT  DSWLFRA RYF IH   D EKLT+A+I+F+  TLDW R++EE + F  W  +K
Subjt:  MNCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAKEECKPFTSWNKMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAAACTTTTGGCCACTTTGAATGTGAACCAAAATTGTTCCTATAATTCTACTGTCGTGGGTAGTTTTTCTATCAATGCTACTACGACTGAAGATGACATTTTCCA
TAACATCTTGGCAAATTTGCATTCTGACAACAATTTCGAGGATATGAATTGTAGCAAATTTAAAAAAGTCAAAATACTTGTGTTTAATGGAACATACTCGGATTCCTGGT
TGTTTCGTGCATATCGATATTTTAACATACACAAACCTATAGATTTGGAGAAGTTGACAATGGCAATTATCAATTTTGAGTCGACAACATTGGATTGGAATCGAGCAAAG
GAAGAATGTAAACCATTTACTAGTTGGAACAAAATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAAACTTTTGGCCACTTTGAATGTGAACCAAAATTGTTCCTATAATTCTACTGTCGTGGGTAGTTTTTCTATCAATGCTACTACGACTGAAGATGACATTTTCCA
TAACATCTTGGCAAATTTGCATTCTGACAACAATTTCGAGGATATGAATTGTAGCAAATTTAAAAAAGTCAAAATACTTGTGTTTAATGGAACATACTCGGATTCCTGGT
TGTTTCGTGCATATCGATATTTTAACATACACAAACCTATAGATTTGGAGAAGTTGACAATGGCAATTATCAATTTTGAGTCGACAACATTGGATTGGAATCGAGCAAAG
GAAGAATGTAAACCATTTACTAGTTGGAACAAAATGAAATTTTGA
Protein sequenceShow/hide protein sequence
MWKLLATLNVNQNCSYNSTVVGSFSINATTTEDDIFHNILANLHSDNNFEDMNCSKFKKVKILVFNGTYSDSWLFRAYRYFNIHKPIDLEKLTMAIINFESTTLDWNRAK
EECKPFTSWNKMKF