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PI0000586 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000586
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr07:9068992..9069592
RNA-Seq ExpressionPI0000586
SyntenyPI0000586
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048521.1 uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa]5.7e-3555.63Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM
        ME+FDL IR+ADLVEP VQGNWFTWTSK+ RVVSF FFNHW+EDPSF +VVS +  R +                      FG  ++  +      KE+M
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM

Query:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        DRAQREVKR+  S  ++RQ GLAT+AFW+ + LEEASLHQK RIRWLELG+
Subjt:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-2640Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV
        ME+FDL IR+ADLVEP VQGNWFTWTSK                                                 + +VVSF FFNHWVEDPSF +VV
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV

Query:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        + +  R +                      FG  ++  +      KE+MDRAQR+V+R+  S  ++RQ  LAT+ FW+A+ LEEASL QKSRIRWL+LGD
Subjt:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]2.3e-2849.37Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSK------SGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDTFGALVRMF-------------------------
        ME+FDL IR+ DLVEP VQGNWFTWTSK      + +VVSF FFNHWVEDPSF +VV+  R  R +    LV +                          
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSK------SGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDTFGALVRMF-------------------------

Query:  -TIKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
           K +MD AQR+V+R+  S  ++RQ  LAT+ FW+A+ LEEASL QKSRIRWL+LGD
Subjt:  -TIKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

TYK28312.1 uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa]4.3e-3555.63Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM
        ME+FDL IR+ADLVEP VQGNWFTWTSK+ RVVSF FFNHW+EDPSF +VVS +  R +                      FG  ++  +      KE+M
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM

Query:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        DRAQREVKR+  S  ++RQ GLAT+AFW+ + LEEASLHQK RIRWLELG+
Subjt:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]1.3e-2640Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV
        ME+FDL IR+ADLVEP VQGNWFTWTSK                                                 + +VVSF FFNHWVEDPSF +VV
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV

Query:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        + +  R +                      FG  ++  +      KE+MDRAQR+V+R+  S  ++RQ  LAT+ FW+A+ LEEASL QKSRIRWL+LGD
Subjt:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041006.1e-2740Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV
        ME+FDL IR+ADLVEP VQGNWFTWTSK                                                 + +VVSF FFNHWVEDPSF +VV
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV

Query:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        + +  R +                      FG  ++  +      KE+MDRAQR+V+R+  S  ++RQ  LAT+ FW+A+ LEEASL QKSRIRWL+LGD
Subjt:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

A0A5A7U4M4 Reverse transcriptase domain-containing protein2.7e-3555.63Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM
        ME+FDL IR+ADLVEP VQGNWFTWTSK+ RVVSF FFNHW+EDPSF +VVS +  R +                      FG  ++  +      KE+M
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM

Query:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        DRAQREVKR+  S  ++RQ GLAT+AFW+ + LEEASLHQK RIRWLELG+
Subjt:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

A0A5A7V275 Reverse transcriptase6.1e-2740Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV
        ME+FDL IR+ADLVEP VQGNWFTWTSK                                                 + +VVSF FFNHWVEDPSF +VV
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSK-------------------------------------------------SGRVVSFCFFNHWVEDPSFSDVV

Query:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        + +  R +                      FG  ++  +      KE+MDRAQR+V+R+  S  ++RQ  LAT+ FW+A+ LEEASL QKSRIRWL+LGD
Subjt:  SSVRVRRQDT--------------------FGALVRMFT-----IKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

A0A5D3D5X6 Reverse transcriptase domain-containing protein1.1e-2849.37Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSK------SGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDTFGALVRMF-------------------------
        ME+FDL IR+ DLVEP VQGNWFTWTSK      + +VVSF FFNHWVEDPSF +VV+  R  R +    LV +                          
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSK------SGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDTFGALVRMF-------------------------

Query:  -TIKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
           K +MD AQR+V+R+  S  ++RQ  LAT+ FW+A+ LEEASL QKSRIRWL+LGD
Subjt:  -TIKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

A0A5D3DXQ8 Reverse transcriptase domain-containing protein2.1e-3555.63Show/hide
Query:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM
        ME+FDL IR+ADLVEP VQGNWFTWTSK+ RVVSF FFNHW+EDPSF +VVS +  R +                      FG  ++  +      KE+M
Subjt:  MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDT--------------------FGALVRMFT-----IKESM

Query:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD
        DRAQREVKR+  S  ++RQ GLAT+AFW+ + LEEASLHQK RIRWLELG+
Subjt:  DRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEEASLHQKSRIRWLELGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTTTGATCTGCTTATTCGTGAAGCTGACTTAGTTGAACCGCCAGTTCAAGGTAACTGGTTCACTTGGACGAGTAAGAGTGGGAGAGTTGTGTCGTTTTGTTT
CTTTAATCATTGGGTGGAGGATCCTTCATTCAGTGATGTTGTGTCTTCGGTGCGTGTGAGGAGGCAAGACACATTTGGGGCCTTAGTGAGGATGTTCACAATTAAAGAGT
CTATGGATAGGGCCCAACGAGAGGTGAAGCGGGATCTCGAGTCTGTTGAGGTGAACCGTCAAACTGGGCTTGCCACTAAGGCTTTCTGGTCGGCTATTCATTTAGAAGAA
GCATCCCTTCATCAGAAATCTCGGATTAGGTGGTTGGAGCTTGGTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGTTTGATCTGCTTATTCGTGAAGCTGACTTAGTTGAACCGCCAGTTCAAGGTAACTGGTTCACTTGGACGAGTAAGAGTGGGAGAGTTGTGTCGTTTTGTTT
CTTTAATCATTGGGTGGAGGATCCTTCATTCAGTGATGTTGTGTCTTCGGTGCGTGTGAGGAGGCAAGACACATTTGGGGCCTTAGTGAGGATGTTCACAATTAAAGAGT
CTATGGATAGGGCCCAACGAGAGGTGAAGCGGGATCTCGAGTCTGTTGAGGTGAACCGTCAAACTGGGCTTGCCACTAAGGCTTTCTGGTCGGCTATTCATTTAGAAGAA
GCATCCCTTCATCAGAAATCTCGGATTAGGTGGTTGGAGCTTGGTGATTAG
Protein sequenceShow/hide protein sequence
MEEFDLLIREADLVEPPVQGNWFTWTSKSGRVVSFCFFNHWVEDPSFSDVVSSVRVRRQDTFGALVRMFTIKESMDRAQREVKRDLESVEVNRQTGLATKAFWSAIHLEE
ASLHQKSRIRWLELGD