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PI0000597 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000597
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr06:25983350..25983812
RNA-Seq ExpressionPI0000597
SyntenyPI0000597
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.9e-3375.44Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPP SP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSF
        PTTYSQAV P K F
Subjt:  PTTYSQAVAPKKSF

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]7.7e-3476.64Show/hide
Query:  RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RPSSS N  PSP+SADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+PS NL+RPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APKKSFK
         P K  K
Subjt:  APKKSFK

KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]1.7e-3376.32Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSP+S DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR PTSPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSF
        PTTYSQAV P K F
Subjt:  PTTYSQAVAPKKSF

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.3e-3372.27Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+ PSSS N A SP+++DQYAMDL FTTVTRS++RSS IR  SPTESSTPPRP ANL+RPSGG+ QMRPPTSP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSFKNFPR
        PTTYSQAV P K F   P+
Subjt:  PTTYSQAVAPKKSFKNFPR

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]9.1e-3573.95Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSP+SADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPSG + QMRPP SP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSFKNFPR
        PTTYSQAV P K F   P+
Subjt:  PTTYSQAVAPKKSFKNFPR

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.4e-3375.44Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+RP SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+RPS G+ QMRPP SP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSF
        PTTYSQAV P K F
Subjt:  PTTYSQAVAPKKSF

A0A5A7U8A0 Uncharacterized protein3.7e-3476.64Show/hide
Query:  RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV
        RGR +STSSKG+RPSSS N  PSP+SADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+PS NL+RPSGG+ QMR P SP SN +SSTPPTTYSQAV
Subjt:  RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAV

Query:  APKKSFK
         P K  K
Subjt:  APKKSFK

A0A5A7UFZ9 Uncharacterized protein8.3e-3476.32Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSP+S DQYAM LGFTT+T+SK+RSSGIRI SPTES TPPRP ANL+RPSG + QMR PTSPLSN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSF
        PTTYSQAV P K F
Subjt:  PTTYSQAVAPKKSF

A0A5A7URC1 Uncharacterized protein6.4e-3472.27Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+ PSSS N A SP+++DQYAMDL FTTVTRS++RSS IR  SPTESSTPPRP ANL+RPSGG+ QMRPPTSP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSFKNFPR
        PTTYSQAV P K F   P+
Subjt:  PTTYSQAVAPKKSFKNFPR

A0A5D3CKX1 Uncharacterized protein4.4e-3573.95Show/hide
Query:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP
        MSS +G  RGR +STSSKG+RPSSS N APSP+SADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+RPSG + QMRPP SP SN ESSTP
Subjt:  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTP

Query:  PTTYSQAVAPKKSFKNFPR
        PTTYSQAV P K F   P+
Subjt:  PTTYSQAVAPKKSFKNFPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATAAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTACCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAAAAAAA
AGTTTCAAAAATTTTCCGCGAGGGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATAAGTGCAGATCAATATGC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTACCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAAAAAAA
AGTTTCAAAAATTTTCCGCGAGGGCTTTAA
Protein sequenceShow/hide protein sequence
MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPISADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPTSPLSNLESSTPPTTYSQAVAPKK
SFKNFPRGL