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PI0000604 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000604
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr09:12324762..12325112
RNA-Seq ExpressionPI0000604
SyntenyPI0000604
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.6e-1158.82Show/hide
Query:  MLGMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT
        +L M+ NLVS+SQLTSA NF+VFG N+VKVY +L+VSG  LMEG+  DS YVM A+ TY++K +   T
Subjt:  MLGMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT

KAA0037350.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.3e-1265.15Show/hide
Query:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT
        GM+ NLVS+SQLTSA NFVVFG +DVKVY +L+VSG  LMEG+  DS YVM AK  YV+K R   T
Subjt:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT

KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.6e-1261.43Show/hide
Query:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVD
        GM+ NLV+ISQLTS GNFVVFGPNDVKVY + +VSG  L+EG+  D  YVM A+  YV+K R  + E VD
Subjt:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVD

KAA0045163.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]7.9e-1469.23Show/hide
Query:  MQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT
        M+ NLV ISQLTSAGNFVVFGP DVKVY +L+VSG  LMEGQ  DS YVMLA+ TY++K R   T
Subjt:  MQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.3e-1369.35Show/hide
Query:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQR
        GM+ NLVS+SQLTSAGNFVVFGP+DVKVY +L+VSG  LMEG+  DS YVM A+  YV+K R
Subjt:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQR

TrEMBL top hitse value%identityAlignment
A0A0A0K4U2 Uncharacterized protein7.4e-2666.99Show/hide
Query:  VSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVDS------HVNKTSSWKAPELEKTPEDEGSFEEGSKE
        V ISQLTSAG FVVFGPN VKVYQDLE SGKLLME Q  DS Y+MLA+D Y+  QR L TEC+DS       +N+  SWKA + EKTP+DE SFEEGSK+
Subjt:  VSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVDS------HVNKTSSWKAPELEKTPEDEGSFEEGSKE

Query:  EIS
        EIS
Subjt:  EIS

A0A5A7T1U9 Integrase, catalytic core1.6e-1265.15Show/hide
Query:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT
        GM+ NLVS+SQLTSA NFVVFG +DVKVY +L+VSG  LMEG+  DS YVM AK  YV+K R   T
Subjt:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT

A0A5A7T2J1 Integrase, catalytic core2.7e-1261.43Show/hide
Query:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVD
        GM+ NLV+ISQLTS GNFVVFGPNDVKVY + +VSG  L+EG+  D  YVM A+  YV+K R  + E VD
Subjt:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVD

A0A5A7TNQ2 UBN2_3 domain-containing protein3.8e-1469.23Show/hide
Query:  MQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT
        M+ NLV ISQLTSAGNFVVFGP DVKVY +L+VSG  LMEGQ  DS YVMLA+ TY++K R   T
Subjt:  MQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRT

A0A5A7TYD2 Integrase, catalytic core1.1e-1369.35Show/hide
Query:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQR
        GM+ NLVS+SQLTSAGNFVVFGP+DVKVY +L+VSG  LMEG+  DS YVM A+  YV+K R
Subjt:  GMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGGAATGCAAAATAATTTGGTGTCAATATCTCAATTGACATCAGCAGGAAACTTTGTCGTGTTTGGACCTAATGATGTCAAGGTGTACCAAGATTTGGAAGTTAG
TGGCAAGTTGTTGATGGAAGGACAATGGAAGGATTCCAGCTATGTCATGTTAGCAAAAGATACCTATGTGCATAAGCAAAGGCCCTTAAGAACAGAGTGCGTTGATTCTC
ATGTTAATAAAACATCATCATGGAAGGCACCCGAATTAGAAAAGACACCTGAGGACGAGGGGTCTTTTGAAGAAGGGTCCAAAGAAGAGATAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGGAATGCAAAATAATTTGGTGTCAATATCTCAATTGACATCAGCAGGAAACTTTGTCGTGTTTGGACCTAATGATGTCAAGGTGTACCAAGATTTGGAAGTTAG
TGGCAAGTTGTTGATGGAAGGACAATGGAAGGATTCCAGCTATGTCATGTTAGCAAAAGATACCTATGTGCATAAGCAAAGGCCCTTAAGAACAGAGTGCGTTGATTCTC
ATGTTAATAAAACATCATCATGGAAGGCACCCGAATTAGAAAAGACACCTGAGGACGAGGGGTCTTTTGAAGAAGGGTCCAAAGAAGAGATAAGTTAA
Protein sequenceShow/hide protein sequence
MLGMQNNLVSISQLTSAGNFVVFGPNDVKVYQDLEVSGKLLMEGQWKDSSYVMLAKDTYVHKQRPLRTECVDSHVNKTSSWKAPELEKTPEDEGSFEEGSKEEIS