; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000623 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000623
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:12915140..12915748
RNA-Seq ExpressionPI0000623
SyntenyPI0000623
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038880370.1 uncharacterized protein LOC120072018 [Benincasa hispida]3.7e-5258.48Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        MA  RY+IE FDGK DF L KAKIKA++GQQK L A+TDP + P+T+++ DKET+E  AY +I+LN++D++LR+++D+ T Y +W KL+E+Y +KDLPN 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKIT
        A+ RERFFT+K+D  KSLT+NL EFK+LS++F+ + D I  ENE+FILLNSLP ++K+VK  LKYGR++IT
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKIT

XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida]4.5e-5855.84Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        M   RY+IE F+ K DF LWKAKIK ++ +QKAL A+TDP + PK + + +KET+E+ AY +IVLN+ D+VLR+++D+ T Y +W KL+++Y +KDLPN 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE
        A++RERFFT+KMD  KSLT+NL EFK LS+DF+ +GD IG ENE+FILLNSLP  +K+VK  LKYGR++IT   +I A+ ++ELEL    +DQ  GE
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE

XP_038887098.1 uncharacterized protein LOC120077280 [Benincasa hispida]5.5e-5656.45Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        MA  +Y+IE FD K DF L KAKIKA++GQQKAL A+TDP + P+T+++ +KET+E+ AY +I+LN++D+VLR+++D+ T Y +W KL+E+Y +KD PN 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELEL
         ++RERFFT+KMD  KSLT+NL EFK+LS++F+ +GD IG ENE+FIL NSLP  +K+VK  LKY R++IT D +I A++++ELEL
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELEL

XP_038889933.1 uncharacterized protein LOC120079695 [Benincasa hispida]3.7e-5259.76Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        M   R++IE FDGK DF LWKAKIKA++GQQKAL A+TD  + PKT T  +KE +E  AY +IVLN++DNVLR+++D++T + +W KL+E+Y +KDL N 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQK
        A+ R+RFFT+KMD  KSLTENL EFK+LS +F+ +GD IG ENE FILLNSLP+++K+VK T+KYGR++
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQK

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]5.0e-5755.84Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        MA  RY+IE FD K DF LWK KIK ++GQQKAL A+TDP + P+T+T+ +KET+E  A  +IVLN++DNVLR+VI++ T Y +W KL+E+Y +KDL N 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE
        A++RERFFT+KMD  KSLT+ L EFK+LS++F+ +G  IG ENE+FILLNSLP ++K+ K  +KYGR++IT + +I A+++RELEL    + Q  GE
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE

TrEMBL top hitse value%identityAlignment
A0A5A7TAZ3 Retrovirus-related Pol polyprotein from transposon TNT 1-944.5e-4850Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        M   +++IE F+G GDFTLW  +I+AI+  Q ALK + DP+ LP TM + DK++ME   Y  ++LN++DNVLR+VI++ TTY + +KL  LY  KDLP+ 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRD
         Y+RE+ F+FKM+ +K+L ENL EFKKL+ +F  LG+K+  E+E+ I +NSL + YKEVK TLKYGR+ +  D VI A+K +ELEL    ++
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRD

A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-944.0e-5251.31Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        M   +++IE FDG GDFTLW  +I AI+G QKALKAL DP++LP T+T+ ++ET+E  AY ++++N++DNVLR+VI++ T +  W+KL  LY+ KDLPN 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTR
         +++E+ F+FK + NK+L ENL EFKKL+      G+K+G ENE+ IL+NS+ + YKEVK  LKYGR+ IT + VI  +K +ELEL T  +
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTR

A0A5C7GXL9 Sucrose-phosphate phosphatase2.8e-4548.21Show/hide
Query:  RYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNHAYVR
        ++DI+ FDG GDF +W+ K+KA++ QQK LKA+  PE+LP ++T E K+ M   A  +I+LNLSDNVLRE+ D++T   +WKKL+ LY +K L N  Y++
Subjt:  RYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNHAYVR

Query:  ERFFTFKMDNNKSLTENLGEFKKLSTDFKDLG--DKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE
        ER F FKMD +K L +NL +FKK++ +  + G  +K+ +ENE+ ILLNSLP+++K+VK  +KYGR  ++ ++ I A+K +ELEL    +D  NGE
Subjt:  ERFFTFKMDNNKSLTENLGEFKKLSTDFKDLG--DKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE

A0A5C7I661 Uncharacterized protein2.8e-4548.21Show/hide
Query:  RYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNHAYVR
        ++DI+ FDG GDF +W+ K+KA++ QQK LKA+  PE+LP ++T E K+ M   A  +I+LNLSDNVLRE+ D++T   +WKKL+ LY +K L N  Y++
Subjt:  RYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNHAYVR

Query:  ERFFTFKMDNNKSLTENLGEFKKLSTDFKDLG--DKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE
        ER F FKMD +K L +NL +FKK++ +  + G  +K+ +ENE+ ILLNSLP+++K+VK  +KYGR  ++ ++ I A+K +ELEL    +D  NGE
Subjt:  ERFFTFKMDNNKSLTENLGEFKKLSTDFKDLG--DKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGE

A0A5D3DVM0 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-4749.21Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        M   +++IE FDG GDFTL   +I A +G QKALKAL DP++LP T+T+ ++ET+E  AY ++++N++DNVLR+VI++ T +  W+ L  LY+ KDL N 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTR
         ++RE+ F+FKM+ NK+L ENL EFKKL+       +K+G E+E+ IL+N + + YKEVK +LKYGR+ IT + VI A+K +ELEL T  +
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTR

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.2e-2532.24Show/hide
Query:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH
        M+  +Y++  F+G   F+ W+ +++ ++ QQ   K L    + P TM  ED   ++  A  +I L+LSD+V+  +ID++T  G+W +L+ LY SK L N 
Subjt:  MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNH

Query:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRE
         Y++++ +   M    +   +L  F  L T   +LG KI  E+++ +LLNSLP++Y  +  T+ +G+  I   DV  A+ + E
Subjt:  AYVRERFFTFKMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGCAAGATATGATATTGAGACGTTTGATGGTAAGGGAGATTTTACCTTGTGGAAAGCAAAGATCAAAGCCATTGTTGGCCAACAAAAGGCATTGAAAGCTCT
CACGGATCCAGAACAGCTACCTAAAACAATGACTCAAGAAGACAAAGAAACTATGGAAAATGCAGCTTATCGTTCTATAGTTCTAAACCTAAGTGACAATGTCCTTAGGG
AGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTGGATGAACTTTATCAGTCCAAAGACTTACCAAACCATGCATATGTAAGGGAAAGATTCTTTACCTTC
AAGATGGACAACAATAAGTCATTGACAGAGAATCTTGGAGAATTCAAGAAGCTGTCAACTGATTTCAAGGACTTGGGAGACAAGATTGGTAATGAAAATGAATCATTCAT
TTTGCTAAACTCACTTCCAAATGCATATAAAGAAGTCAAAATGACTCTCAAATATGGAAGGCAAAAAATCACCAACGATGATGTCATTTTAGCAATAAAAATCAGAGAAC
TAGAGTTAAATACACATACAAGAGATCAAGTCAATGGTGAAGAACAAAAACAACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGCAAGATATGATATTGAGACGTTTGATGGTAAGGGAGATTTTACCTTGTGGAAAGCAAAGATCAAAGCCATTGTTGGCCAACAAAAGGCATTGAAAGCTCT
CACGGATCCAGAACAGCTACCTAAAACAATGACTCAAGAAGACAAAGAAACTATGGAAAATGCAGCTTATCGTTCTATAGTTCTAAACCTAAGTGACAATGTCCTTAGGG
AGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTGGATGAACTTTATCAGTCCAAAGACTTACCAAACCATGCATATGTAAGGGAAAGATTCTTTACCTTC
AAGATGGACAACAATAAGTCATTGACAGAGAATCTTGGAGAATTCAAGAAGCTGTCAACTGATTTCAAGGACTTGGGAGACAAGATTGGTAATGAAAATGAATCATTCAT
TTTGCTAAACTCACTTCCAAATGCATATAAAGAAGTCAAAATGACTCTCAAATATGGAAGGCAAAAAATCACCAACGATGATGTCATTTTAGCAATAAAAATCAGAGAAC
TAGAGTTAAATACACATACAAGAGATCAAGTCAATGGTGAAGAACAAAAACAACTATAA
Protein sequenceShow/hide protein sequence
MAVARYDIETFDGKGDFTLWKAKIKAIVGQQKALKALTDPEQLPKTMTQEDKETMENAAYRSIVLNLSDNVLREVIDKETTYGMWKKLDELYQSKDLPNHAYVRERFFTF
KMDNNKSLTENLGEFKKLSTDFKDLGDKIGNENESFILLNSLPNAYKEVKMTLKYGRQKITNDDVILAIKIRELELNTHTRDQVNGEEQKQL