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PI0000627 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000627
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr09:18058916..18060252
RNA-Seq ExpressionPI0000627
SyntenyPI0000627
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34152.1 hypothetical protein [Cucumis melo subsp. melo]1.9e-1965.79Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP
        +VG ++G+DM+ ++IEIIYRHPNLT+SG ++FMSFPI NEQ M TMF+IA+P PNMVHLYV VS +   INLN EP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP

KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]3.7e-5579.71Show/hide
Query:  MADKILGFMLFMNDNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMP
        MADKILGFMLF+N N+IDG DG+DYDQPACGGFTISVNSGIVF+QF EIVGS+VGID+ I+ IEIIYRHP+LT SGLI+FM FPIPNEQAMKTMF+IAMP
Subjt:  MADKILGFMLFMNDNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMP

Query:  IPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDPN
        I NMVHLYVNVSR+SLDINLNS+ F Q +DRT V+ P+
Subjt:  IPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDPN

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.5e-1965.79Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP
        +VG ++G+DMS ++IEIIYRHPNLT+SG ++FM FPI NEQ M TMF+IA+P PNMVHLYV VS +   INLN EP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP

TYJ98387.1 hypothetical protein E5676_scaffold232G001340 [Cucumis melo var. makuwa]2.9e-2068.42Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP
        +VG +VG+DMS ++IEIIYRHPNLT+SG ++FM FPI NEQ M TMF+IA+P PNMVHLYV VS + L INLN EP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP

TYK20962.1 hypothetical protein E5676_scaffold1293G00170 [Cucumis melo var. makuwa]2.3e-2061.8Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDP
        +VG ++G+DMS+N+IEIIYRHPNL+SSG ++FMSFPI NEQAM TMF+I +P  NMVHLY+ VSR+ L INLN E   ++ +  H VDP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDP

TrEMBL top hitse value%identityAlignment
A0A5A7THR5 Uncharacterized protein1.8e-5579.71Show/hide
Query:  MADKILGFMLFMNDNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMP
        MADKILGFMLF+N N+IDG DG+DYDQPACGGFTISVNSGIVF+QF EIVGS+VGID+ I+ IEIIYRHP+LT SGLI+FM FPIPNEQAMKTMF+IAMP
Subjt:  MADKILGFMLFMNDNIIDGVDGVDYDQPACGGFTISVNSGIVFQQFTEIVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMP

Query:  IPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDPN
        I NMVHLYVNVSR+SLDINLNS+ F Q +DRT V+ P+
Subjt:  IPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDPN

A0A5D3BFY6 Uncharacterized protein9.2e-2065.79Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP
        +VG ++G+DM+ ++IEIIYRHPNLT+SG ++FMSFPI NEQ M TMF+IA+P PNMVHLYV VS +   INLN EP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP

A0A5D3BGY9 Uncharacterized protein1.4e-2068.42Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP
        +VG +VG+DMS ++IEIIYRHPNLT+SG ++FM FPI NEQ M TMF+IA+P PNMVHLYV VS + L INLN EP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP

A0A5D3DBJ9 Uncharacterized protein1.1e-2061.8Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDP
        +VG ++G+DMS+N+IEIIYRHPNL+SSG ++FMSFPI NEQAM TMF+I +P  NMVHLY+ VSR+ L INLN E   ++ +  H VDP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDP

E5GCF3 Uncharacterized protein9.2e-2065.79Show/hide
Query:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP
        +VG ++G+DM+ ++IEIIYRHPNLT+SG ++FMSFPI NEQ M TMF+IA+P PNMVHLYV VS +   INLN EP
Subjt:  IVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGAGATTCCCATCTACAGTATTTCCGTGAACATCAAACCCGTGAACATCGTGAGAAGACCTTTCAAGCTGCTGCCGGTGAACAGGTCATGTCGGACTGGAACAA
CGCCCGTGAAGGCCCTCGTGAAGTATTCTTGGATTGGACGAATATTAAAAAAGGAGTTCTCATCATCAATTCGAGGAAAAATATAATCGTTCTTCAATTTAAAATGGCGG
ACAAAATATTGGGATTTATGTTGTTTATGAATGATAATATAATTGATGGTGTTGATGGAGTCGATTATGACCAACCAGCTTGTGGAGGTTTTACCATAAGTGTGAACAGT
GGAATTGTGTTTCAACAATTCACTGAAATTGTAGGATCAGCAGTTGGTATAGATATGAGCATAAACAAAATAGAAATTATATATAGACATCCAAATCTAACCTCTTCGGG
GTTAATAAAATTTATGTCATTCCCTATACCAAATGAACAAGCAATGAAAACCATGTTTGCAATTGCAATGCCAATCCCGAACATGGTTCATCTATATGTGAATGTAAGCA
GGATGAGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCAGTTTAAAGACCGAACTCATGTTGTTGACCCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGAGATTCCCATCTACAGTATTTCCGTGAACATCAAACCCGTGAACATCGTGAGAAGACCTTTCAAGCTGCTGCCGGTGAACAGGTCATGTCGGACTGGAACAA
CGCCCGTGAAGGCCCTCGTGAAGTATTCTTGGATTGGACGAATATTAAAAAAGGAGTTCTCATCATCAATTCGAGGAAAAATATAATCGTTCTTCAATTTAAAATGGCGG
ACAAAATATTGGGATTTATGTTGTTTATGAATGATAATATAATTGATGGTGTTGATGGAGTCGATTATGACCAACCAGCTTGTGGAGGTTTTACCATAAGTGTGAACAGT
GGAATTGTGTTTCAACAATTCACTGAAATTGTAGGATCAGCAGTTGGTATAGATATGAGCATAAACAAAATAGAAATTATATATAGACATCCAAATCTAACCTCTTCGGG
GTTAATAAAATTTATGTCATTCCCTATACCAAATGAACAAGCAATGAAAACCATGTTTGCAATTGCAATGCCAATCCCGAACATGGTTCATCTATATGTGAATGTAAGCA
GGATGAGTTTGGATATAAACTTGAATTCTGAACCATTCGGTCAGTTTAAAGACCGAACTCATGTTGTTGACCCTAATTAA
Protein sequenceShow/hide protein sequence
MVGDSHLQYFREHQTREHREKTFQAAAGEQVMSDWNNAREGPREVFLDWTNIKKGVLIINSRKNIIVLQFKMADKILGFMLFMNDNIIDGVDGVDYDQPACGGFTISVNS
GIVFQQFTEIVGSAVGIDMSINKIEIIYRHPNLTSSGLIKFMSFPIPNEQAMKTMFAIAMPIPNMVHLYVNVSRMSLDINLNSEPFGQFKDRTHVVDPN