CuGenDBv2

Gene ID	PI0000670
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Serine/threonine-protein phosphatase 7 long form-like protein
Genome location	chr02:17111325..17114217
RNA-Seq Expression	PI0000670
Synteny	PI0000670
Gene Ontology terms	GO:0010073 - meristem maintenance (biological process) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]

3.9e-21

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Query:  YALEKILKWAARSSKH----------------------------EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLP
        YAL+KILKW+     H                             IM LN GPIDPDVLYDQ  HRS  VWDDR   E++C RRE VV+R IP H  +LP
Subjt:  YALEKILKWAARSSKH----------------------------EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLP

Query:  LLQASGFYGMARLSFI
        LL+ASGFYG+ARL FI
Subjt:  LLQASGFYGMARLSFI

KAA0054449.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]

2.5e-20

69.44

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Query:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        EIMALN GPIDPDVLYD+  HRS  VWDDR   E++C RRE VV+R IP H  +LPLL+ASGFYG+ARL FI
Subjt:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

KAA0064192.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]

9.4e-23

70.13

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Query:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        R    +IM LNP PID +VLYDQ FHRSS VWDDRTVGEL CIRRE VV+RNIP H ++LP+LQ S FYG+ARL FI
Subjt:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

TYK02837.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]

9.4e-23

70.13

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Query:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        R    +IM LNP PID +VLYDQ FHRSS VWDDRTVGEL CIRRE VV+RNIP H ++LP+LQ S FYG+ARL FI
Subjt:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

XP_016903709.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]

1.8e-21

72.22

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Query:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        EIM LN  PID +VLYDQ F+RSS VWDDRTVGEL CIRRE +V+RNI  HC +LPLLQ S FYG+ARL FI
Subjt:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E663 serine/threonine-protein phosphatase 7 long form homolog

8.5e-22

72.22

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Query:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        EIM LN  PID +VLYDQ F+RSS VWDDRTVGEL CIRRE +V+RNI  HC +LPLLQ S FYG+ARL FI
Subjt:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

A0A5A7ULW8 Mediator of RNA polymerase II transcription subunit 12-like isoform X1

1.2e-20

69.44

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Query:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        EIMALN GPIDPDVLYD+  HRS  VWDDR   E++C RRE VV+R IP H  +LPLL+ASGFYG+ARL FI
Subjt:  EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

A0A5A7V745 Serine/threonine-protein phosphatase 7 long form-like protein

4.5e-23

70.13

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Query:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        R    +IM LNP PID +VLYDQ FHRSS VWDDRTVGEL CIRRE VV+RNIP H ++LP+LQ S FYG+ARL FI
Subjt:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

A0A5D3BTN9 Serine/threonine-protein phosphatase 7 long form-like protein

4.5e-23

70.13

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Query:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI
        R    +IM LNP PID +VLYDQ FHRSS VWDDRTVGEL CIRRE VV+RNIP H ++LP+LQ S FYG+ARL FI
Subjt:  RSSKHEIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein

1.9e-21

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Query:  YALEKILKWAARSSKH----------------------------EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLP
        YAL+KILKW+     H                             IM LN GPIDPDVLYDQ  HRS  VWDDR   E++C RRE VV+R IP H  +LP
Subjt:  YALEKILKWAARSSKH----------------------------EIMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLP

Query:  LLQASGFYGMARLSFI
        LL+ASGFYG+ARL FI
Subjt:  LLQASGFYGMARLSFI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G04865.1 Aminotransferase-like, plant mobile domain family protein

6.1e-04

56.25

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Query:  NPGPIDPDVLYDQRFHRSSFVWDDRTVGELSC
        NPGP+   VLYDQ  H SS VWD +  G L C
Subjt:  NPGPIDPDVLYDQRFHRSSFVWDDRTVGELSC

AT2G25010.1 Aminotransferase-like, plant mobile domain family protein

3.6e-04

48.57

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Query:  MALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSC
        M ++ GP+DP VLY+Q  H SS VW+ +  G L C
Subjt:  MALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSC

Sequences

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CDS sequence

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ATGGCAGACAAAATTTTGGGATTTATGTTGTTTATGAATGGTAATATGATTGATGGTGTTGATGGAGTCGATTATGACCTACCGGCTTCTGGGTATTTTAGCATAAGTGT
GAATAGTGAAATTGTCTTCGAACAATTCATTGAAATCATAGGATCATCAATTGACCGATCTCAATTTAAGGACACTGACGATGAACCAGTTGCATCGCCGATTTACAACG
ATGAAGAAATGGTGGCTAATAATGAATATAGAGACTTTCGAACAGAAACGGACGATGAGTATGCACTCGAGAAAATCTTGAAATGGGCTGCAAGATCCAGTAAACATGAG
ATTATGGCTTTAAACCCAGGACCGATTGATCCTGATGTTCTGTATGATCAGAGGTTTCATCGGTCTTCATTTGTATGGGACGATAGAACAGTAGGTGAGTTGAGTTGTAT
ACGTAGAGAGGTAGTAGTCCGCCGCAATATCCCTCCTCACTGTAGGATGCTGCCTTTACTTCAAGCTTCAGGATTTTATGGGATGGCCAGATTGAGTTTCATCTAG

mRNA sequence

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Protein sequence

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MADKILGFMLFMNGNMIDGVDGVDYDLPASGYFSISVNSEIVFEQFIEIIGSSIDRSQFKDTDDEPVASPIYNDEEMVANNEYRDFRTETDDEYALEKILKWAARSSKHE
IMALNPGPIDPDVLYDQRFHRSSFVWDDRTVGELSCIRREVVVRRNIPPHCRMLPLLQASGFYGMARLSFI

PI0000670 (gene) of Melon (PI 482460) v1 genome