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PI0000701 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000701
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:3955331..3955576
RNA-Seq ExpressionPI0000701
SyntenyPI0000701
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041444.1 retrotransposon protein [Cucumis melo var. makuwa]7.4e-2063.75Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  Q QDAS TR EVVRQL+ IPEL+ +DR R MRILMR+VDDMKAF+D+P+ +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1961.25Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        MEY N+QL  IAEWP  Q QDA+ TR E+VRQL+ IPEL+ +DR R MRI+MR+VDDMKAF+++PD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

KAA0051580.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-1961.25Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  Q QDA+ TR E+VRQL+ IPEL+ +DR R MRILMR+VDDMKAF+++PD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-2165.43Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        +E ANDQL+ IAEWPK   QD   TR EV+RQL+ IPELS LDRARC+R LM+++ DMKAF+ +P+E+K+DYC VILQDDA
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-2169.14Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        ME++ND+LKAI EW   Q QDAS    EVVRQLQ IPELSR DR R M+ILM +VDDMKAF+DI DE+KLDYCT+I QD+A
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

TrEMBL top hitse value%identityAlignment
A0A5A7TDD6 Retrotransposon protein3.6e-2063.75Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  Q QDAS TR EVVRQL+ IPEL+ +DR R MRILMR+VDDMKAF+D+P+ +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

A0A5A7U8U9 Retrotransposon protein8.0e-2061.25Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  Q QDA+ TR E+VRQL+ IPEL+ +DR R MRILMR+VDDMKAF+++PD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

A0A5A7UUF7 Retrotransposon protein4.2e-2165.43Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        +E ANDQL+ IAEWPK   QD   TR EV+RQL+ IPELS LDRARC+R LM+++ DMKAF+ +P+E+K+DYC VILQDDA
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

A0A5A7V469 Retrotransposon protein4.2e-2169.14Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA
        ME++ND+LKAI EW   Q QDAS    EVVRQLQ IPELSR DR R M+ILM +VDDMKAF+DI DE+KLDYCT+I QD+A
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA

A0A5D3D058 Retrotransposon protein1.4e-1962.5Show/hide
Query:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD
        +EY N+QL  IAEWP  Q QDA+ TR E+VRQL+ IPEL+ +DR R MRILMR+VDDMKAF++IPD +K  YC++ILQ++
Subjt:  MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATATGCTAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAAGAACAATGGCAAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAACTACAGGGAATCCC
AGAGCTAAGTCGATTAGATAGGGCTCGTTGTATGCGCATATTGATGCGCAGCGTGGATGACATGAAAGCATTTATAGACATCCCGGACGAGGTTAAGTTGGATTACTGCA
CGGTCATACTCCAAGATGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATATGCTAATGACCAACTTAAGGCCATTGCAGAATGGCCCAAAGAACAATGGCAAGATGCAAGCGTGACACGTGCGGAAGTCGTTAGACAACTACAGGGAATCCC
AGAGCTAAGTCGATTAGATAGGGCTCGTTGTATGCGCATATTGATGCGCAGCGTGGATGACATGAAAGCATTTATAGACATCCCGGACGAGGTTAAGTTGGATTACTGCA
CGGTCATACTCCAAGATGATGCTTGA
Protein sequenceShow/hide protein sequence
MEYANDQLKAIAEWPKEQWQDASVTRAEVVRQLQGIPELSRLDRARCMRILMRSVDDMKAFIDIPDEVKLDYCTVILQDDA