CuGenDBv2

Gene ID	PI0000722
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Cyclin-dependent kinases regulatory subunit
Genome location	chr11:5394931..5398273
RNA-Seq Expression	PI0000722
Synteny	PI0000722
Gene Ontology terms	GO:0007346 - regulation of mitotic cell cycle (biological process) GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process) GO:0051301 - cell division (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0016301 - kinase activity (molecular function) GO:0019901 - protein kinase binding (molecular function) GO:0042393 - histone binding (molecular function) GO:0043130 - ubiquitin binding (molecular function) GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domains	IPR000789 - Cyclin-dependent kinase, regulatory subunit IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008465423.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1-like [Cucumis melo]

6.8e-43

97.75

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQEN  QQNALAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

XP_022944260.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata]

2.0e-42

95.51

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDI+EYRHVVLPP+VAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

XP_022957804.1 cyclin-dependent kinases regulatory subunit 1 [Cucurbita moschata]

1.2e-42

96.63

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDD YEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

XP_022986411.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita maxima]

2.6e-42

95.51

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDI+EYRHVVLPP+VAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

XP_038902899.1 cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida]

1.4e-43

98.88

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CNU7 Cyclin-dependent kinases regulatory subunit

3.3e-43

97.75

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQEN  QQNALAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

A0A5D3DKQ6 Cyclin-dependent kinases regulatory subunit

3.3e-43

97.75

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQEN  QQNALAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

A0A6J1FYK0 Cyclin-dependent kinases regulatory subunit

9.6e-43

95.51

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDDI+EYRHVVLPP+VAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

A0A6J1H322 Cyclin-dependent kinases regulatory subunit

5.6e-43

96.63

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDD YEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

A0A6J1K8L9 Cyclin-dependent kinases regulatory subunit

5.6e-43

96.63

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK
        MGQIQYSEKYFDD YEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN LAAK
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

SwissProt top hits

e value

%identity

Alignment

A2XCH8 Cyclin-dependent kinases regulatory subunit 1

3.3e-40

95.06

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA
        MGQIQYSEKYFDD YEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA

O23249 Cyclin-dependent kinases regulatory subunit 1

1.7e-41

95.12

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ
        MGQIQYSEKYFDD +EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQEN AQ
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ

P55933 Probable cyclin-dependent kinases regulatory subunit

2.9e-28

80.3

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Query:  IQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR
        IQYSEKY+DD +EYRHV+LPP+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR
Subjt:  IQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 1

3.3e-40

95.06

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA
        MGQIQYSEKYFDD YEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 2

1.2e-37

89.74

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE
        MGQIQYS+KYFDD +EYRHVVLPPEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ +
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE

Arabidopsis top hits

e value

%identity

Alignment

AT2G27960.1 cyclin-dependent kinase-subunit 1

1.2e-42

95.12

Show/hide

Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ
        MGQIQYSEKYFDD +EYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQEN AQ
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ

AT2G27970.1 CDK-subunit 2

8.3e-39

89.74

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Query:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE
        MGQIQYS+KYFDD +EYRHVVLPPEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ +
Subjt:  MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE

Sequences

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CDS sequence

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ATGGGTCAGATTCAATACTCTGAGAAGTACTTCGACGACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTCGCGAAGTTGCTTCCTAAGAATCGTCTGCTCTC
GGAAAATGAATGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGTCCCGAACCGCATATCATGCTATTCAGGAGGCCCCTGAACTACC
AACAGCAGCAGGAGAATCTTGCTCAACAAAATGCGCTTGCTGCTAAATGA

mRNA sequence

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AAGAAAGAAAAAAATCCTTACCGCTATACACGTGGCTAAAATTGATTGGCCGACTTTGAATTTCATTACTTCAAATCGAGCGTATTTATATAAATAATATGCCATTTCGT
CGGGTTCTGGAGCCCTAGTTGAGCCTTGAGTTCACTGTTCATACGTTGTTTATTTCGGCGATCAAAACCATTGAATCCGCTTCGTTGTATTGTAATTCTCTCTGGAAGAC
GAAAACCACTCAGTGATAGATGGGTCAGATTCAATACTCTGAGAAGTACTTCGACGACATTTATGAGTACAGGCACGTGGTTCTCCCACCCGAAGTCGCGAAGTTGCTTC
CTAAGAATCGTCTGCTCTCGGAAAATGAATGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGTCCCGAACCGCATATCATGCTATTC
AGGAGGCCCCTGAACTACCAACAGCAGCAGGAGAATCTTGCTCAACAAAATGCGCTTGCTGCTAAATGATTGCTTCATTTTACTGATTTTGTGAAGTGCTACTATCCAGA
AAGAAAGCAGTTAATATTCAGTCATAAACATATAATGGTTTTAAAATGAAATATCCTGGTGTCTGTGTTCAATCCTCTTGCTTAGAAAATCTGCAGGAGTTTCTATGTTT
ACCTTGAACTTTGTATGTTTGTAGAGGAGGCTTATATATATGCGTATGCTTTGTATCTTTGCTGGACGCTGCAATTCCTTGAATTTAGAAGCAAAGATGGGTTTTATGGA
TCTTGATCCTTAACTTTCTGTGCAGAGGTGAATTACTTTTATGCTGTGTGACTTCCAAATTGTATGGTTTTTAGAACAAAAGATGGATTTTGTTGATTGTGAATCATGAT
CTTGCTCCTTTTCTTTTATGGGTGTATGCTAGTTCTTCATTTCTGCAACATCCAGTCTTGAGAATTTGTACCACTTTAGCGAACTGCATTCTGCCACATACATCTATCAT
TTGGATGGTGTAAATTTTGTTTTAAATTCTTTGATTTATGATTTAGGCCAAAGAGATTGGAATGGTATAAATGAATCTCAACGGCCTGAGTATTGAAAAGGTTAGATCTC
TTCCAAATCTTGATTTAGTATGCTTTCCCAATTTACTTGCTGCAACTTTGTTCTTTTATTCATCTTCATCTCAAGTAGGAAATCCTGGCTTTACCTTTTTTACCTTAAAT
GAATGCTATCGGTTCAATTAATGAATTGTAAATAAGAATATTCTGCATGAACCATTTTTTTTGTTATGAAAATGACAGGATTTCAAATGGTTTTCATGTTGCAAATCACC
CAATAAAATTATCGGTTGAATTAGTGAAAATTAGTAGCACCAATCTAAACTTCTTTATTAAGTGCATCATTACTTTGAGTTGAAATTCTAGTTAGGAATCTGTTTAGAAC
CTTGAAAAAAGAAAAAAAAAATCTCATACTTAAATCTCTTGTTAACATCATTCATTGGTCAGAAAATCTTCACCATGCTGATTTAATAACAATACAATCATACAATACAA
GTGCACCTATTCTAAGTTCTACCATTACTTCATAATCGAAAATACAAGGAATAACTCAACAACATTGACAATAAGTAAATGCTCTCTTTCTGTAACTATCTATTGTACAA
ATCAGAAAAGAAATCATAATTCTAATTCACATCTTCATTAGTCTCTGTAATTCTAAGTTGCTGCTTTAATAAAGCAGCCCTTCTTGCCTTAAGCTCAGCCCCTTCAATAT
GCAACAAAACCCATTTCTCATTCATATCCTTCAAATTCTTCTCCTCCATTCTCCTCAGCCCTTCTCTCCACACCCCATTCCTCGGAAACTGCCGAGAAAATTCAGCCACA
AGAACAGGAAAGTTCTTCAGATCAACATCAACCCCAACCCCTGCTTTTCTAGTAATTGATCTTTGTTTGATTCTTCGTGAAAGTATCCTTGAAGGTGAAATTACCTGTGG
TTTTCTTGTTATAGGTGTGGGGGATTTTCCCCAGATGCTGCGGCCGAGGTCAAGGATCTGACGGTGGTGAGGAGTTTTGATGAAGGATTTTGTTCTTGCGAATTTGTGGT
ACAGGAGTTTGAGGCGATGGAGCTTATCGGCGATGACGGAGTGGGAGAATTTTGGGCCGACGGCGGTCTGAAGGCGGTCCAAGGCCGGAGAATCGAGAGTAGGGAGAGAA
TTCTTGGTGGGGTTTTCGGATCTGGAGATTTGGAGGTAGGAATTCAGGAGATTGAGTTCATCTTCGTCGGTGAAATGGAGTTGATCGTTTTGATTGTTGGATTGGGTTAG
GGTTAGGGTTTCGGTAGAGGCGTTGGACGGCAGTGACCGGTGGGGCGTTGACATGATGGGTATTGGGACGATATAGATCGGAGTTTCGGTGGGGTTTCTTTTTGGCGAGA
GTGTCAATGACTGGTAAAGGTTTTTGAGTCACAAATTTGGTGAGACGGTCAATGGTATGGCCAACAAAATTTCCCGCCCCAATCCCCATTTTATTTTATTTATCATTTAT
TATTATTATATGAGGATAGGGACTCGAGCCTCTAATATCAAAGTGGGTATTCCCATATTAATATACCGGAAGAATTTTTGAACCTTTGGAGGATGATTGGGGTAAGAAGT
TGAATGGTAAGAAG

Protein sequence

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MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNALAAK

PI0000722 (gene) of Melon (PI 482460) v1 genome