| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0056048.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.5e-83 | 61.19 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFVQG PLKVTKCGVCGLVGHPNDKCP +IEDVNV+ +YD HGNT NSGWRDNPN RWGNDNQK TQ +SSNQG NL++I+K LA NTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------ELHDEIDEMSIHDEFFDQ---------------ELI
Q+MKQQ TQLT AISK++GKGKLPAQPNH NVS ISLRSGKIL+ PP + K+ EL + ++ I+ F Q +L
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------ELHDEIDEMSIHDEFFDQ---------------ELI
Query: ENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
+ ++ ++ LE +N N K IELK LPP+LKY+FLG+KN FP+IISREL+Q QEERLI+VLKKKR+AIGWTLD+IK
Subjt: ENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
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| KAA0060435.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.6e-80 | 45.94 | Show/hide |
Query: KCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQQKMKQQKTQLTIAISKL
+CGVCGLVGHPNDKCP +I DVN++ +YD H NTYNSGWRDNPNLRW NDNQK TQA +SSNQG NLE+I+K LATNTLSFQQ+MKQQ TQLT ISK+
Subjt: KCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQQKMKQQKTQLTIAISKL
Query: EGKGKLPAQPNHGNVSAISLRS-------GKILEIPPSEEKK----------------------------------------------------------
+GKGKLPAQP+H NVSAI LRS ++ + PP K
Subjt: EGKGKLPAQPNHGNVSAISLRS-------GKILEIPPSEEKK----------------------------------------------------------
Query: ---------------------------------------------------------------------------------------ELHDEIDEMSIHD
ELHD +DE SIHD
Subjt: ---------------------------------------------------------------------------------------ELHDEIDEMSIHD
Query: EFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
EFF+QE++EN++LLE N+DYALEK+NCDNLFFSPQK IELK LPPYLKY+FLG+KNTFPVIIS+EL+Q QEERLI+VLKKK++AIGWTLD+IK
Subjt: EFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
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| KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.6e-83 | 66.42 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFVQG P KVTKCGVCGLVGHPNDKC +IEDVN++ +YD H NTYNSGWRDNPNLRWGNDNQK TQA S+SSNQG NLE+I+K L TNTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKKELHDEIDEMSIHDEFFDQELIENKEL--LEPNIDYA-LEKSNCDNLFF
Q+MKQQ TQLT AISK++GKGKLPAQP++ NVSAISLRSGKIL+ P ++EKK+ + +E+ E F +E I L ++ YA K C N
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKKELHDEIDEMSIHDEFFDQELIENKEL--LEPNIDYA-LEKSNCDNLFF
Query: SPQ---KHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
+ + K IELK LPP+LKY+FLG+KNTF VIISREL+Q QEERLI+VLKKK++ IGWTLD+IK
Subjt: SPQ---KHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
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| KAA0061315.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.1e-89 | 47.96 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFV G PLKVTKCGVCGLVGH NDKCP +IEDVN++ +YD HGNTYNSGWRDNPNLRWGNDNQK T A S+SS QG NLE+I+K LATNTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Q+MKQQ TQLT SK++GKGKL AQP H NVS ISLRSGKIL+ P S+EKK
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
ELHDE+DE+SIHDEFF+QE++EN+ELLEPN+ YALEK+N DNLFFSPQK IELK LPP+L Y+FLG+KN FPVIISREL+Q QEERLI+
Subjt: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
Query: VLKKKRKAIGWTLDNIK
VLKKK++AIG TLD+IK
Subjt: VLKKKRKAIGWTLDNIK
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| TYK14267.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.1e-89 | 47.96 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFV G PLKVTKCGVCGLVGH NDKCP +IEDVN++ +YD HGNTYNSGWRDNPNLRWGNDNQK T A S+SS QG NLE+I+K LATNTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Q+MKQQ TQLT SK++GKGKL AQP H NVS ISLRSGKIL+ P S+EKK
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
ELHDE+DE+SIHDEFF+QE++EN+ELLEPN+ YALEK+N DNLFFSPQK IELK LPP+L Y+FLG+KN FPVIISREL+Q QEERLI+
Subjt: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
Query: VLKKKRKAIGWTLDNIK
VLKKK++AIG TLD+IK
Subjt: VLKKKRKAIGWTLDNIK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7ULU1 Retrotransposon gag protein | 1.7e-83 | 61.19 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFVQG PLKVTKCGVCGLVGHPNDKCP +IEDVNV+ +YD HGNT NSGWRDNPN RWGNDNQK TQ +SSNQG NL++I+K LA NTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------ELHDEIDEMSIHDEFFDQ---------------ELI
Q+MKQQ TQLT AISK++GKGKLPAQPNH NVS ISLRSGKIL+ PP + K+ EL + ++ I+ F Q +L
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------ELHDEIDEMSIHDEFFDQ---------------ELI
Query: ENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
+ ++ ++ LE +N N K IELK LPP+LKY+FLG+KN FP+IISREL+Q QEERLI+VLKKKR+AIGWTLD+IK
Subjt: ENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
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| A0A5A7V0Q7 Retrotransposon gag protein | 7.6e-84 | 66.42 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFVQG P KVTKCGVCGLVGHPNDKC +IEDVN++ +YD H NTYNSGWRDNPNLRWGNDNQK TQA S+SSNQG NLE+I+K L TNTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKKELHDEIDEMSIHDEFFDQELIENKEL--LEPNIDYA-LEKSNCDNLFF
Q+MKQQ TQLT AISK++GKGKLPAQP++ NVSAISLRSGKIL+ P ++EKK+ + +E+ E F +E I L ++ YA K C N
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKKELHDEIDEMSIHDEFFDQELIENKEL--LEPNIDYA-LEKSNCDNLFF
Query: SPQ---KHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
+ + K IELK LPP+LKY+FLG+KNTF VIISREL+Q QEERLI+VLKKK++ IGWTLD+IK
Subjt: SPQ---KHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
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| A0A5A7V3J9 Reverse transcriptase | 7.9e-81 | 45.94 | Show/hide |
Query: KCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQQKMKQQKTQLTIAISKL
+CGVCGLVGHPNDKCP +I DVN++ +YD H NTYNSGWRDNPNLRW NDNQK TQA +SSNQG NLE+I+K LATNTLSFQQ+MKQQ TQLT ISK+
Subjt: KCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQQKMKQQKTQLTIAISKL
Query: EGKGKLPAQPNHGNVSAISLRS-------GKILEIPPSEEKK----------------------------------------------------------
+GKGKLPAQP+H NVSAI LRS ++ + PP K
Subjt: EGKGKLPAQPNHGNVSAISLRS-------GKILEIPPSEEKK----------------------------------------------------------
Query: ---------------------------------------------------------------------------------------ELHDEIDEMSIHD
ELHD +DE SIHD
Subjt: ---------------------------------------------------------------------------------------ELHDEIDEMSIHD
Query: EFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
EFF+QE++EN++LLE N+DYALEK+NCDNLFFSPQK IELK LPPYLKY+FLG+KNTFPVIIS+EL+Q QEERLI+VLKKK++AIGWTLD+IK
Subjt: EFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIKVLKKKRKAIGWTLDNIK
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| A0A5A7V668 Retrotransposon gag protein | 5.5e-90 | 47.96 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFV G PLKVTKCGVCGLVGH NDKCP +IEDVN++ +YD HGNTYNSGWRDNPNLRWGNDNQK T A S+SS QG NLE+I+K LATNTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Q+MKQQ TQLT SK++GKGKL AQP H NVS ISLRSGKIL+ P S+EKK
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
ELHDE+DE+SIHDEFF+QE++EN+ELLEPN+ YALEK+N DNLFFSPQK IELK LPP+L Y+FLG+KN FPVIISREL+Q QEERLI+
Subjt: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
Query: VLKKKRKAIGWTLDNIK
VLKKK++AIG TLD+IK
Subjt: VLKKKRKAIGWTLDNIK
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| A0A5D3CQR9 Retrotransposon gag protein | 5.5e-90 | 47.96 | Show/hide |
Query: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
MTTLLTSFV G PLKVTKCGVCGLVGH NDKCP +IEDVN++ +YD HGNTYNSGWRDNPNLRWGNDNQK T A S+SS QG NLE+I+K LATNTLSFQ
Subjt: MTTLLTSFVQGGPLKVTKCGVCGLVGHPNDKCPNLIEDVNVICKYDLHGNTYNSGWRDNPNLRWGNDNQKPTQATSSSSNQGMNLENIVKTLATNTLSFQ
Query: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Q+MKQQ TQLT SK++GKGKL AQP H NVS ISLRSGKIL+ P S+EKK
Subjt: QKMKQQKTQLTIAISKLEGKGKLPAQPNHGNVSAISLRSGKILEIPPSEEKK------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
ELHDE+DE+SIHDEFF+QE++EN+ELLEPN+ YALEK+N DNLFFSPQK IELK LPP+L Y+FLG+KN FPVIISREL+Q QEERLI+
Subjt: ----------ELHDEIDEMSIHDEFFDQELIENKELLEPNIDYALEKSNCDNLFFSPQKHEIELKALPPYLKYVFLGEKNTFPVIISRELDQSQEERLIK
Query: VLKKKRKAIGWTLDNIK
VLKKK++AIG TLD+IK
Subjt: VLKKKRKAIGWTLDNIK
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