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PI0000733 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000733
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr10:870721..871107
RNA-Seq ExpressionPI0000733
SyntenyPI0000733
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041279.1 gag/pol protein [Cucumis melo var. makuwa]7.3e-4675Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEEC P P +NASQ+V+DAYD W KAN++A++YILASMSD+LSKKHE MVT RQIMDSL+EMFGQ SIQI+ +AIKY+YNARMKEGQSVRE+VL+M+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVA+ NGAV DE+SQVS+IL+SLPK+FL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
KAA0041821.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-4575Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEECSP P +NASQ V+DAYD WTK N+KA++YILASMSD+LSKKHE MVT RQIMDS +EMFGQPSIQI+ +AIKYVYNARMKEGQSV E+VLD+++ F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NV E NG V DE+SQVS+IL+SL KSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-4675.78Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEEC P P +NASQ+V+DAYD WTKAN+KA +Y+LAS+SD+LSKKHE MVT RQIMDSL+EMFGQPSIQI+ +AIKYVYNARMKEGQSVRE+VL M+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVAE N A+ DE+SQVS+IL+SL KSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-4675.78Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEEC P P +NASQ+V+DAYD WTKAN+KA +Y+LAS+SD+LSKKHE MVT RQIMDSL+EMFGQPSIQI+ +AIKYVYNARMKEGQSVRE+VL M+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVAE N A+ DE+SQVS+IL+SL KSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
TYK21841.1 gag/pol protein [Cucumis melo var. makuwa]2.5e-4675.78Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        M+EC P P +NASQ+V+D YDRWTKAN+KA+VYILASMSD+LSKKHE MVT  QIMDSL+EMFGQ SIQI+  AIKYVYNA MKEGQSVR++V+DM+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVAE NG V DE+SQ+SFIL+SLPKSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
TrEMBL top hitse value%identityAlignment
A0A5A7TIU9 Gag/pol protein3.5e-4675Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEEC P P +NASQ+V+DAYD W KAN++A++YILASMSD+LSKKHE MVT RQIMDSL+EMFGQ SIQI+ +AIKY+YNARMKEGQSVRE+VL+M+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVA+ NGAV DE+SQVS+IL+SLPK+FL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
A0A5A7TJT4 Gag/pol protein6.0e-4675Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEECSP P +NASQ V+DAYD WTK N+KA++YILASMSD+LSKKHE MVT RQIMDS +EMFGQPSIQI+ +AIKYVYNARMKEGQSV E+VLD+++ F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NV E NG V DE+SQVS+IL+SL KSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
A0A5A7VA67 Gag/pol protein1.2e-4675.78Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEEC P P +NASQ+V+DAYD WTKAN+KA +Y+LAS+SD+LSKKHE MVT RQIMDSL+EMFGQPSIQI+ +AIKYVYNARMKEGQSVRE+VL M+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVAE N A+ DE+SQVS+IL+SL KSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
A0A5D3D0D9 Gag/pol protein1.2e-4675.78Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        MEEC P P +NASQ+V+DAYD WTKAN+KA +Y+LAS+SD+LSKKHE MVT RQIMDSL+EMFGQPSIQI+ +AIKYVYNARMKEGQSVRE+VL M+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVAE N A+ DE+SQVS+IL+SL KSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
A0A5D3DDU7 Gag/pol protein1.2e-4675.78Show/hide
Query:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF
        M+EC P P +NASQ+V+D YDRWTKAN+KA+VYILASMSD+LSKKHE MVT  QIMDSL+EMFGQ SIQI+  AIKYVYNA MKEGQSVR++V+DM+V F
Subjt:  MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQF

Query:  NVAETNGAVIDEQSQVSFILESLPKSFL
        NVAE NG V DE+SQ+SFIL+SLPKSFL
Subjt:  NVAETNGAVIDEQSQVSFILESLPKSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTTCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTGAGGGATGCATATGACCGTTGGACAAAGGCCAATGAAAAGGCTCAAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTACACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCCGGCACAAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAATATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCAGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTTCTCCTTCCCCTGTTCGAAATGCATCCCAGACCGTGAGGGATGCATATGACCGTTGGACAAAGGCCAATGAAAAGGCTCAAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAGTCCATGGTCACTACACGTCAGATCATGGACTCCCTCCAGGAGATGTTTGGACAACCGTCCATTCAAATCCGGCACAAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAATATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCAGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTTAA
Protein sequenceShow/hide protein sequence
MEECSPSPVRNASQTVRDAYDRWTKANEKAQVYILASMSDVLSKKHESMVTTRQIMDSLQEMFGQPSIQIRHKAIKYVYNARMKEGQSVREYVLDMMVQFNVAETNGAVI
DEQSQVSFILESLPKSFL