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PI0000755 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000755
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDYW_deaminase domain-containing protein
Genome locationchr10:19131829..19132087
RNA-Seq ExpressionPI0000755
SyntenyPI0000755
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR018130 - Ribosomal protein S2, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034379.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]3.4e-0544.87Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
        MVSAC KCG+I FA NL D+MP RD+                                VNEVSMVSV+TA  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
KGN51882.1 hypothetical protein Csa_009244 [Cucumis sativus]5.3e-0662.26Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDFVNEVSMVSVLTASAHLGALDHRNRHML
        MVSAC+KCG+ DFAC+      H   VNEV MVSVLTA AHL ALD  N  ML
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDFVNEVSMVSVLTASAHLGALDHRNRHML
XP_004135465.1 putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis sativus]2.0e-0544.87Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
        MVSAC KCG+I FA NL D+MP RDF                                VNEVSM+SV+TA  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
XP_008446300.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Cucumis melo]3.4e-0544.87Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
        MVSAC KCG+I FA NL D+MP RD+                                VNEVSMVSV+TA  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
XP_038891785.1 putative pentatricopeptide repeat-containing protein At5g40405 [Benincasa hispida]1.0e-0446.75Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGAL
        MVSAC KCG+ DFA NL DAMP RD                                 VNEVSMVSVLTA  HLGAL
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGAL
TrEMBL top hitse value%identityAlignment
A0A0A0KSJ7 DYW_deaminase domain-containing protein9.7e-0644.87Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
        MVSAC KCG+I FA NL D+MP RDF                                VNEVSM+SV+TA  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
A0A0A0KTX4 Uncharacterized protein2.6e-0662.26Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDFVNEVSMVSVLTASAHLGALDHRNRHML
        MVSAC+KCG+ DFAC+      H   VNEV MVSVLTA AHL ALD  N  ML
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDFVNEVSMVSVLTASAHLGALDHRNRHML
A0A1S3BFJ2 putative pentatricopeptide repeat-containing protein At5g404051.7e-0544.87Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
        MVSAC KCG+I FA NL D+MP RD+                                VNEVSMVSV+TA  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
A0A5A7SZ47 Putative pentatricopeptide repeat-containing protein1.7e-0544.87Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
        MVSAC KCG+I FA NL D+MP RD+                                VNEVSMVSV+TA  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRDF--------------------------------VNEVSMVSVLTASAHLGALD
A0A5J5AEP7 DYW_deaminase domain-containing protein1.1e-0456.36Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRD---------FVNEVSMVSVLTASAHLGALD
        MVSAC K G + FA  L D MP +D          VNEVSMVSVL+A  HLGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRD---------FVNEVSMVSVLTASAHLGALD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G40405.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.9e-0433.33Show/hide
Query:  MVSACIKCGNIDFACNLLDAMPHRD--------------------------------FVNEVSMVSVLTASAHLGALD
        MV+AC +CG++ FA  L + MP RD                                 VN V+M+SVL+A   LGALD
Subjt:  MVSACIKCGNIDFACNLLDAMPHRD--------------------------------FVNEVSMVSVLTASAHLGALD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTGCTTGTATCAAATGTGGCAATATTGATTTTGCATGCAACCTGCTCGACGCAATGCCTCATAGGGATTTTGTCAATGAGGTGTCTATGGTTTCTGTTTTAAC
AGCCAGCGCTCACTTGGGTGCACTAGACCACAGAAATAGACACATGCTTACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTGCTTGTATCAAATGTGGCAATATTGATTTTGCATGCAACCTGCTCGACGCAATGCCTCATAGGGATTTTGTCAATGAGGTGTCTATGGTTTCTGTTTTAAC
AGCCAGCGCTCACTTGGGTGCACTAGACCACAGAAATAGACACATGCTTACATAG
Protein sequenceShow/hide protein sequence
MVSACIKCGNIDFACNLLDAMPHRDFVNEVSMVSVLTASAHLGALDHRNRHMLT