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PI0000823 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000823
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 7
Genome locationchr07:20297451..20298818
RNA-Seq ExpressionPI0000823
SyntenyPI0000823
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR017246 - Snapin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144641.1 uncharacterized protein LOC101218072 [Cucumis sativus]7.2e-2070.79Show/hide
Query:  MLINIIRDFDSKADDTLKSQNIFHLPSIV------------------LLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        MLINIIRDFDSKADDTLKSQN  HL S +                  ++QHASRISNVRKRVLSLNSILRTIQRR+DNIDRAITMGNLP
Subjt:  MLINIIRDFDSKADDTLKSQNIFHLPSIV------------------LLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
XP_008444284.1 PREDICTED: uncharacterized protein LOC103487651 [Cucumis melo]3.2e-2071.91Show/hide
Query:  MLINIIRDFDSKADDTLKSQNIFHLPSIV------------------LLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        MLINIIRDFDSKADDTLKSQN  HL S +                  ++QHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
Subjt:  MLINIIRDFDSKADDTLKSQNIFHLPSIV------------------LLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
XP_038897515.1 uncharacterized protein LOC120085558 isoform X1 [Benincasa hispida]5.5e-2066Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP-GQTNPFFNINLI
        MLINIIRDFDSKADDTLKSQ+                +   P   ++QHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLP G  N   NIN I
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP-GQTNPFFNINLI
XP_038897518.1 uncharacterized protein LOC120085558 isoform X3 [Benincasa hispida]5.5e-2064.95Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPGQTNPFFNIN
        MLINIIRDFDSKADDTLKSQ+                +   P   ++QHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLPG+      IN
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPGQTNPFFNIN
XP_038897522.1 uncharacterized protein LOC120085558 isoform X6 [Benincasa hispida]9.4e-2069.32Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPG
        MLINIIRDFDSKADDTLKSQ+                +   P   ++QHASRISNVRKRVLSLNSILRTIQRRVDNIDRAI+MGNLPG
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPG
TrEMBL top hitse value%identityAlignment
A0A1S3BAU4 Biogenesis of lysosome-related organelles complex 1 subunit 71.6e-2071.91Show/hide
Query:  MLINIIRDFDSKADDTLKSQNIFHLPSIV------------------LLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        MLINIIRDFDSKADDTLKSQN  HL S +                  ++QHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
Subjt:  MLINIIRDFDSKADDTLKSQNIFHLPSIV------------------LLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
A0A6J1CN29 Biogenesis of lysosome-related organelles complex 1 subunit 72.8e-1766.28Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNL
        ML NIIRDFDSKADDTLKSQ+                +   P   ++QHASRISNVRKRVLSLNSILR+IQRRVDNIDRAI MGNL
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNL
A0A6J1FEP4 Biogenesis of lysosome-related organelles complex 1 subunit 72.3e-1663.22Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        MLINIIRDFDSKADDTLKSQ+                +   P   ++QHASRIS+VRKRVLSLNSIL +IQRR+DNIDRAI+MGN P
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
A0A6J1IKP2 Biogenesis of lysosome-related organelles complex 1 subunit 72.8e-1764.37Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        MLINIIRDFDSKADDTLKSQ+                +   P   ++QHASRIS+VRKRVLSLNSILR+IQRR+DNIDRAI+MGN P
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
A0A6J1J178 Biogenesis of lysosome-related organelles complex 1 subunit 71.2e-1560.92Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
        ML NI+RDFDSKADDTLKSQ+                +   P   ++QHA RIS+VRKRVLSLNSILR++QRRVDNIDRAI+M NLP
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79070.1 SNARE-associated protein-related5.0e-1143.9Show/hide
Query:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAIT
        ML ++I+DFDSKA DTL SQ+                + + P   ++QHASRIS+V++RV SLN +L+++QRR+DNID  ++
Subjt:  MLINIIRDFDSKADDTLKSQN----------------IFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAIT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATCAACATCATAAGGGATTTTGACTCCAAAGCTGATGATACTCTTAAAAGCCAGAACATCTTTCATCTTCCCTCGATCGTCTTACTACAGCATGCCTCAAGGAT
ATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAGTGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGGACAAA
CTAACCCATTCTTCAATATCAACCTCATTAAGATGTCTTCACAAACCAAAGGTTTCATGCTTGATAATCATAGTTTCAGCTGTGGGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTATCAACATCATAAGGGATTTTGACTCCAAAGCTGATGATACTCTTAAAAGCCAGAACATCTTTCATCTTCCCTCGATCGTCTTACTACAGCATGCCTCAAGGAT
ATCTAATGTAAGAAAGAGAGTTTTGTCACTGAATTCCATCCTAAGAACTATACAACGAAGAGTGGATAACATAGATCGGGCAATCACGATGGGCAATCTACCAGGACAAA
CTAACCCATTCTTCAATATCAACCTCATTAAGATGTCTTCACAAACCAAAGGTTTCATGCTTGATAATCATAGTTTCAGCTGTGGGCAATAG
Protein sequenceShow/hide protein sequence
MLINIIRDFDSKADDTLKSQNIFHLPSIVLLQHASRISNVRKRVLSLNSILRTIQRRVDNIDRAITMGNLPGQTNPFFNINLIKMSSQTKGFMLDNHSFSCGQ