; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000825 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000825
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:3192836..3195843
RNA-Seq ExpressionPI0000825
SyntenyPI0000825
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046553.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-9545.49Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D  +++H       +   + +   SLIQFGSLEPVV+YSSPE LQ ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI ++ E L R R+PI LK+FF +NFP +IVSCH  STTE+D  P N               + + T + E+L S+ INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILK DDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKKDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAV
                                                           PVTKGT+K EQ  IT+KK+ + D L  ++N +L T+TK   P  E IA 
Subjt:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAV

Query:  PQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFK
         Q++ S PPVL YIPLSRRKKGESPFAE S+NL +   EILKE+FT PLTK++KG AK+IEK+ +EA L E+RT EGFD KAYKLMAKAGYDFTTRTE K
Subjt:  PQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFK

Query:  S-KIFDERHGLSPTQRKLQKQ
        S KIFDER  LSPTQ+KLQKQ
Subjt:  S-KIFDERHGLSPTQRKLQKQ

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]3.8e-2568.93Show/hide
Query:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND
        +P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND

Query:  IRT
        I+T
Subjt:  IRT

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.4e-9142.33Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILK DDVSTI  S                                                                              
Subjt:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM
            PVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM

Query:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        PLTK++KG AK+IEK+ ++A L E+RT EGFD KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQ
Subjt:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]4.7e-9233.79Show/hide
Query:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQES------------------------
        +P PNIMSVMVTDVDTSEDRMA+LEKKVNM +K VEERD+EIA L+NHIESRDAAESSHT+T KN +KGKAI+QES                        
Subjt:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQES------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------SLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKT
                             SLIQFGSLE +V+YSSPE LQ ND RT  PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR T
Subjt:  ---------------------SLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKT

Query:  RKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTI
        RKN RKF PI +E E L R R+PI LK+FF +NFP +I SCH  STTE+D  PSN               + E T K E+L  + INDLL+L RE+KDTI
Subjt:  RKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTI

Query:  IEILKKDDVSTIPASQTKAF--------------------------------------------------------------------------------
        IEILK DDVSTI  S   A+                                                                                
Subjt:  IEILKKDDVSTIPASQTKAF--------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------PVT
                                                                                                         PVT
Subjt:  -------------------------------------------------------------------------------------------------PVT

Query:  KGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDK
        KGT+K EQ  IT+KKS + D L  ++N +  T+TK   P  E IA  +++ S  PVL YIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++K
Subjt:  KGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDK

Query:  GGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        G AK+IEK+ +EA L E+RT EGF+ KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ KLQKQ
Subjt:  GGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.4e-9142.33Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILK DDVSTI  S                                                                              
Subjt:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM
            PVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM

Query:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        PLTK++KG AK+IEK+ ++A L E+RT EGFD KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQ
Subjt:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]6.0e-2361.61Show/hide
Query:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND
        +P PNIMSVMVTDVDTSEDRM  LEKKVNM +KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND

Query:  IRTVHPKEEEKH
        I+T +    + H
Subjt:  IRTVHPKEEEKH

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.4e-9142.33Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILK DDVSTI  S                                                                              
Subjt:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM
            PVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM

Query:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        PLTK++KG AK+IEK+ ++A L E+RT EGFD KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQ
Subjt:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.3e-2262.39Show/hide
Query:  PNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRT
        PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+ IA  +NHIESRDAAESSHT T KN +KGKAI+QES      S+  + +    E++  N I+T
Subjt:  PNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRT

Query:  VHPKEEEKH
         +    + H
Subjt:  VHPKEEEKH

TrEMBL top hitse value%identityAlignment
A0A5A7TSN4 Ty3-gypsy retrotransposon protein7.5e-9645.49Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D  +++H       +   + +   SLIQFGSLEPVV+YSSPE LQ ND R    KEEEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI ++ E L R R+PI LK+FF +NFP +IVSCH  STTE+D  P N               + + T + E+L S+ INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQTKA--------------------------------------------------------------------------
        RE+KDTIIEILK DDVST   S TKA                                                                          
Subjt:  REIKDTIIEILKKDDVSTIPASQTKA--------------------------------------------------------------------------

Query:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAV
                                                           PVTKGT+K EQ  IT+KK+ + D L  ++N +L T+TK   P  E IA 
Subjt:  --------------------------------------------------FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAV

Query:  PQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFK
         Q++ S PPVL YIPLSRRKKGESPFAE S+NL +   EILKE+FT PLTK++KG AK+IEK+ +EA L E+RT EGFD KAYKLMAKAGYDFTTRTE K
Subjt:  PQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFK

Query:  S-KIFDERHGLSPTQRKLQKQ
        S KIFDER  LSPTQ+KLQKQ
Subjt:  S-KIFDERHGLSPTQRKLQKQ

A0A5A7TZU9 Ribonuclease H6.6e-9242.33Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILK DDVSTI  S                                                                              
Subjt:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM
            PVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM

Query:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        PLTK++KG AK+IEK+ ++A L E+RT EGFD KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQ
Subjt:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

A0A5A7TZU9 Ribonuclease H1.8e-2568.93Show/hide
Query:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND
        +P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND

Query:  IRT
        I+T
Subjt:  IRT

A0A5A7TZU9 Ribonuclease H6.6e-9245.22Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKEEEK V+N +EGWTLV RRKK KQ++S+KES   R Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L R R+PI LK+FF +NFP +IVSCH  S TE+D  PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQTKAF-------------------------------------------------------------------------
        RE+KDTIIEILK DDVSTI +S T+ +                                                                         
Subjt:  REIKDTIIEILKKDDVSTIPASQTKAF-------------------------------------------------------------------------

Query:  -------------------------------------------PVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKP
                                                   PVTKGT+K EQ  IT+KKS + D   G++N +  T+TK +    E IA  Q++ S P
Subjt:  -------------------------------------------PVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKP

Query:  PVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDER
         VL YIPLSRRK GES FAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ +EA L E+RT EGFD K YKLMAKAGYDFTTR E KS KIFDER
Subjt:  PVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDER

Query:  HGLSPTQRKLQKQ
          LSPTQ+KLQKQ
Subjt:  HGLSPTQRKLQKQ

A0A5A7UJR2 Reverse transcriptase2.3e-9233.79Show/hide
Query:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQES------------------------
        +P PNIMSVMVTDVDTSEDRMA+LEKKVNM +K VEERD+EIA L+NHIESRDAAESSHT+T KN +KGKAI+QES                        
Subjt:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQES------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------SLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKT
                             SLIQFGSLE +V+YSSPE LQ ND RT  PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR T
Subjt:  ---------------------SLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKT

Query:  RKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTI
        RKN RKF PI +E E L R R+PI LK+FF +NFP +I SCH  STTE+D  PSN               + E T K E+L  + INDLL+L RE+KDTI
Subjt:  RKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTI

Query:  IEILKKDDVSTIPASQTKAF--------------------------------------------------------------------------------
        IEILK DDVSTI  S   A+                                                                                
Subjt:  IEILKKDDVSTIPASQTKAF--------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------PVT
                                                                                                         PVT
Subjt:  -------------------------------------------------------------------------------------------------PVT

Query:  KGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDK
        KGT+K EQ  IT+KKS + D L  ++N +  T+TK   P  E IA  +++ S  PVL YIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++K
Subjt:  KGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDK

Query:  GGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        G AK+IEK+ +EA L E+RT EGF+ KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ KLQKQ
Subjt:  GGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

A0A5D3BIH8 Uncharacterized protein6.6e-9242.33Show/hide
Query:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG
        +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKEEEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KG
Subjt:  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKG

Query:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP
        KSQRR TRKN RKF PI +E E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E T K E+L  + INDLL+L 
Subjt:  KSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLP

Query:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------
        RE+KDTIIEILK DDVSTI  S                                                                              
Subjt:  REIKDTIIEILKKDDVSTIPASQ-----------------------------------------------------------------------------

Query:  -----------------------------------------------------------------------------TKA--------------------
                                                                                     TKA                    
Subjt:  -----------------------------------------------------------------------------TKA--------------------

Query:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM
            PVTKGT+K EQ  IT+KKS + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRKKGESPF E S+NL V   EILKE+FT 
Subjt:  ---FPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTM

Query:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ
        PLTK++KG AK+IEK+ ++A L E+RT EGFD KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQ
Subjt:  PLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQ

A0A5D3BIH8 Uncharacterized protein2.9e-2361.61Show/hide
Query:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND
        +P PNIMSVMVTDVDTSEDRM  LEKKVNM +KAVEERD+EIA L+NHIESRDAAESSHT+T KN +KGKAI+QES      S+  + V    E++  N 
Subjt:  MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKND

Query:  IRTVHPKEEEKH
        I+T +    + H
Subjt:  IRTVHPKEEEKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGA
AAGGGATTATGAGATTGCATCCCTGAGAAATCATATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGC
AGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTGTATATTCTTCACCGGAGATCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAA
AAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAA
GGGTAAGTCTCAAAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGAAT
TTTTCGCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTTAGTACAACCGAGGATGACACTTCTCCCTCAAATTCTGCAGAAGTCAGTACAATTGGGGATGAC
ACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGA
GATACTAAAAAAGGATGATGTCTCGACTATTCCTGCATCACAGACAAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGT
CAAAGGAAGTGGATGTACTCAAAGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAACGAAAGTATAGCGGTTCCTCAAGAAAAAGCCTCA
AAACCTCCTGTTTTACATTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGA
AAGTTTCACCATGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCTAGAAAAACGAACGACGGAAGGATTCGATC
AAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGACTTTCTCCTACGCAAAGGAAG
CTTCAAAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGA
AAGGGATTATGAGATTGCATCCCTGAGAAATCATATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGC
AGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTGTATATTCTTCACCGGAGATCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAA
AAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAA
GGGTAAGTCTCAAAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGAAT
TTTTCGCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTTAGTACAACCGAGGATGACACTTCTCCCTCAAATTCTGCAGAAGTCAGTACAATTGGGGATGAC
ACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGA
GATACTAAAAAAGGATGATGTCTCGACTATTCCTGCATCACAGACAAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGT
CAAAGGAAGTGGATGTACTCAAAGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAACGAAAGTATAGCGGTTCCTCAAGAAAAAGCCTCA
AAACCTCCTGTTTTACATTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGA
AAGTTTCACCATGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCTAGAAAAACGAACGACGGAAGGATTCGATC
AAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGACTTTCTCCTACGCAAAGGAAG
CTTCAAAAGCAATGA
Protein sequenceShow/hide protein sequence
MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEE
KHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDD
TSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQTKAFPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKAS
KPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKSKIFDERHGLSPTQRK
LQKQ