; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000849 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000849
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetroelement pol polyprotein-like
Genome locationchr09:14922074..14924135
RNA-Seq ExpressionPI0000849
SyntenyPI0000849
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]3.7e-3762.4Show/hide
Query:  SSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNI
        SSYNQI  TLD++A NNEEWD D F + RGGRG+++EG+D+NV+V  QGQM AMNNLL+ M  LQVNA  SS QSV Q+D++G +  G PH  D CPLNI
Subjt:  SSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNI

Query:  KTLAFVRNDPYFNTYNPGWRNHLNF
        + +A+V++DPY NTYNP WRNH NF
Subjt:  KTLAFVRNDPYFNTYNPGWRNHLNF

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]4.2e-4142.25Show/hide
Query:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNR------RGGRGRSDEGMDKNVVVALQGQMIA
        M+K CPH+ IPEC+LME FYF L+K T Q+A+ VF  GML SSYNQIK  LDTMASN++EW  + FG+R      +G RGR ++G+D +++VALQGQ+I 
Subjt:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNR------RGGRGRSDEGMDKNVVVALQGQMIA

Query:  MNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHP
        M N+L+SM +LQVN  RSS+Q V Q++++G VG   PHNT+ CPLN + +A+++NDP            ++  WGG                        
Subjt:  MNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHP

Query:  RHHSNRPPHPHQEQQHTTTTPSTSSSMEN-------LISEYI-RPQGSLPSNTEMPNQ
                        TT   S +SS++N       L S++  RP+ S PSNTE PNQ
Subjt:  RHHSNRPPHPHQEQQHTTTTPSTSSSMEN-------LISEYI-RPQGSLPSNTEMPNQ

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]2.1e-3235.59Show/hide
Query:  VVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGD
        +VAL  Q++ M  LL+ M +++VN  +S +  V Q+ +LG VG GGPHNTDTCP N +T+A+V+NDPY NTYN GWRNHLNF WG   K  +G +     
Subjt:  VVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGD

Query:  HRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYIRPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHSTTEI
                               ++  T      +    +I   I+P                                 TI+ PKT             
Subjt:  HRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYIRPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHSTTEI

Query:  DSTKSLGLNYCEEEVSSQLLSL-----EEFLEEPKYITKEINVMSGERKSEPLDLPTKGEKRNKPSVEEPQELELKPLPNHLKYAYLRENDTLLI
                          LL L     + +     YI +E++ +  E+K E LDL TKGEK+ KPS+EEPQEL+LKPL NHLKYAYLRENDTLL+
Subjt:  DSTKSLGLNYCEEEVSSQLLSL-----EEFLEEPKYITKEINVMSGERKSEPLDLPTKGEKRNKPSVEEPQELELKPLPNHLKYAYLRENDTLLI

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.3e-3160.33Show/hide
Query:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLK
        +VKACP +GIPEC+ MEVFYF L+K T Q  + +F+ GML SSYNQIKATLD+M++N++EWD   FG+R   RGR+ EG+DK+VVV LQGQMIAMNNLL+
Subjt:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLK

Query:  SMPILQVNATRSSMQSVNQID
        SM + QVNA  + + +V Q++
Subjt:  SMPILQVNATRSSMQSVNQID

XP_038874978.1 putative uncharacterized protein DDB_G0279653 [Benincasa hispida]9.7e-3037.29Show/hide
Query:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEG-MDKNVVVALQGQMIAMNNLL
        +VK  PH GI  C+LME FY  LN++TQ  ADA  + G ++ +Y + K  LD ++ N ++W  D +G R   R R+D   +  + +  L  QM A+ +LL
Subjt:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEG-MDKNVVVALQGQMIAMNNLL

Query:  KSMPILQVNATRSSMQ--SVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQG----RQGGQGDHRGEASGYH
        ++M I Q   ++SS Q  +  Q+  +  V  GG H  + CP N +++  ++N+PY NTYNPGWRNH NF WG  G  NQG     Q     +RG  S +H
Subjt:  KSMPILQVNATRSSMQ--SVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQG----RQGGQGDHRGEASGYH

Query:  PRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYI
           + +    PH  Q  ++ T    SS E+L+  YI
Subjt:  PRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYI

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.1e-3160.33Show/hide
Query:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLK
        +VKACP +GIPEC+ MEVFYF L+K T Q  + +F+ GML SSYNQIKATLD+M++N++EWD   FG+R   RGR+ EG+DK+VVV LQGQMIAMNNLL+
Subjt:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLK

Query:  SMPILQVNATRSSMQSVNQID
        SM + QVNA  + + +V Q++
Subjt:  SMPILQVNATRSSMQSVNQID

A0A5A7VE68 Uncharacterized protein1.0e-3235.59Show/hide
Query:  VVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGD
        +VAL  Q++ M  LL+ M +++VN  +S +  V Q+ +LG VG GGPHNTDTCP N +T+A+V+NDPY NTYN GWRNHLNF WG   K  +G +     
Subjt:  VVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGD

Query:  HRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYIRPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHSTTEI
                               ++  T      +    +I   I+P                                 TI+ PKT             
Subjt:  HRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYIRPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHSTTEI

Query:  DSTKSLGLNYCEEEVSSQLLSL-----EEFLEEPKYITKEINVMSGERKSEPLDLPTKGEKRNKPSVEEPQELELKPLPNHLKYAYLRENDTLLI
                          LL L     + +     YI +E++ +  E+K E LDL TKGEK+ KPS+EEPQEL+LKPL NHLKYAYLRENDTLL+
Subjt:  DSTKSLGLNYCEEEVSSQLLSL-----EEFLEEPKYITKEINVMSGERKSEPLDLPTKGEKRNKPSVEEPQELELKPLPNHLKYAYLRENDTLLI

A0A5D3CC26 Uncharacterized protein2.0e-4142.25Show/hide
Query:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNR------RGGRGRSDEGMDKNVVVALQGQMIA
        M+K CPH+ IPEC+LME FYF L+K T Q+A+ VF  GML SSYNQIK  LDTMASN++EW  + FG+R      +G RGR ++G+D +++VALQGQ+I 
Subjt:  MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNR------RGGRGRSDEGMDKNVVVALQGQMIA

Query:  MNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHP
        M N+L+SM +LQVN  RSS+Q V Q++++G VG   PHNT+ CPLN + +A+++NDP            ++  WGG                        
Subjt:  MNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHP

Query:  RHHSNRPPHPHQEQQHTTTTPSTSSSMEN-------LISEYI-RPQGSLPSNTEMPNQ
                        TT   S +SS++N       L S++  RP+ S PSNTE PNQ
Subjt:  RHHSNRPPHPHQEQQHTTTTPSTSSSMEN-------LISEYI-RPQGSLPSNTEMPNQ

A0A5D3CSC7 Uncharacterized protein1.8e-3762.4Show/hide
Query:  SSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNI
        SSYNQI  TLD++A NNEEWD D F + RGGRG+++EG+D+NV+V  QGQM AMNNLL+ M  LQVNA  SS QSV Q+D++G +  G PH  D CPLNI
Subjt:  SSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCPLNI

Query:  KTLAFVRNDPYFNTYNPGWRNHLNF
        + +A+V++DPY NTYNP WRNH NF
Subjt:  KTLAFVRNDPYFNTYNPGWRNHLNF

A0A5D3D2S0 Uncharacterized protein1.0e-2936.4Show/hide
Query:  MLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCP
        ML+SSY QIK TLD + +N++E   DD   +   RGR+D GMD+NV+VALQGQ+  M  LL+SM + QV+A  + +Q+V Q+D++  VG G PH TD C 
Subjt:  MLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNATRSSMQSVNQIDDLGYVGRGGPHNTDTCP

Query:  LNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYI---------
        LN +  A+V++ PY NTYN                         G++RGEA  +  RH+        Q QQ TT TPS+ SSM  L+ +Y+         
Subjt:  LNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSSMENLISEYI---------

Query:  ---------------------RPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHS
                             RP GSLPSN E+PN   G  K K   +  R       H+   K  N ++ S
Subjt:  ---------------------RPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAGCATGCCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTGTTCTATTTTGATCTGAATAAGGCGACACAGCAGACTGCTGATGCTGTGTTTTTACG
TGGTATGTTGGAAAGCTCATACAACCAGATTAAGGCAACTCTGGATACAATGGCCAGCAACAATGAAGAATGGGATAAAGACGATTTCGGCAATCGTCGAGGAGGACGAG
GAAGAAGTGATGAGGGAATGGATAAGAACGTCGTGGTGGCGTTGCAAGGACAGATGATTGCGATGAACAACCTGTTAAAATCAATGCCAATATTGCAGGTTAATGCCACC
AGAAGCTCTATGCAATCGGTGAATCAAATTGATGATTTGGGATACGTGGGACGTGGTGGTCCTCACAATACTGACACATGCCCACTTAACATTAAAACTCTCGCGTTCGT
AAGGAACGACCCCTACTTCAACACCTACAATCCTGGTTGGAGGAATCACCTTAACTTTGGATGGGGAGGAACGGGTAAAAAAAATCAAGGGCGACAAGGTGGTCAAGGTG
ATCATCGCGGGGAAGCATCTGGCTACCACCCGAGACACCATAGCAACAGACCACCGCATCCCCATCAAGAACAGCAACACACCACCACTACTCCATCCACATCTTCATCA
ATGGAAAACCTCATCAGCGAGTATATAAGGCCACAAGGATCACTCCCTAGCAATACAGAAATGCCTAATCAGGTGGGAGGATCCGAAAAAGAGAAGTGTCAAGTTGTGAC
ACTGCGGAGCGGAAGGAATTTGACCATCCACGATCCTAAAACCAAATGTAGAAACTCCACTTCTCATTCTACTACCGAGATCGACAGCACAAAATCCCTGGGATTGAATT
ATTGCGAGGAAGAAGTCAGTTCTCAACTGCTCAGCCTTGAAGAATTCTTGGAAGAACCCAAATACATAACAAAGGAAATAAATGTCATGTCTGGCGAAAGGAAGTCAGAG
CCTTTGGATCTGCCAACCAAAGGCGAGAAGAGAAATAAGCCATCAGTCGAGGAACCACAAGAGTTAGAGCTCAAGCCTTTGCCAAACCACCTGAAATATGCATACTTGAG
GGAGAATGACACCCTGCTGATTGATTCTTTTGTATTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAGCATGCCCCCACAATGGCATTCCTGAATGCATATTGATGGAGGTGTTCTATTTTGATCTGAATAAGGCGACACAGCAGACTGCTGATGCTGTGTTTTTACG
TGGTATGTTGGAAAGCTCATACAACCAGATTAAGGCAACTCTGGATACAATGGCCAGCAACAATGAAGAATGGGATAAAGACGATTTCGGCAATCGTCGAGGAGGACGAG
GAAGAAGTGATGAGGGAATGGATAAGAACGTCGTGGTGGCGTTGCAAGGACAGATGATTGCGATGAACAACCTGTTAAAATCAATGCCAATATTGCAGGTTAATGCCACC
AGAAGCTCTATGCAATCGGTGAATCAAATTGATGATTTGGGATACGTGGGACGTGGTGGTCCTCACAATACTGACACATGCCCACTTAACATTAAAACTCTCGCGTTCGT
AAGGAACGACCCCTACTTCAACACCTACAATCCTGGTTGGAGGAATCACCTTAACTTTGGATGGGGAGGAACGGGTAAAAAAAATCAAGGGCGACAAGGTGGTCAAGGTG
ATCATCGCGGGGAAGCATCTGGCTACCACCCGAGACACCATAGCAACAGACCACCGCATCCCCATCAAGAACAGCAACACACCACCACTACTCCATCCACATCTTCATCA
ATGGAAAACCTCATCAGCGAGTATATAAGGCCACAAGGATCACTCCCTAGCAATACAGAAATGCCTAATCAGGTGGGAGGATCCGAAAAAGAGAAGTGTCAAGTTGTGAC
ACTGCGGAGCGGAAGGAATTTGACCATCCACGATCCTAAAACCAAATGTAGAAACTCCACTTCTCATTCTACTACCGAGATCGACAGCACAAAATCCCTGGGATTGAATT
ATTGCGAGGAAGAAGTCAGTTCTCAACTGCTCAGCCTTGAAGAATTCTTGGAAGAACCCAAATACATAACAAAGGAAATAAATGTCATGTCTGGCGAAAGGAAGTCAGAG
CCTTTGGATCTGCCAACCAAAGGCGAGAAGAGAAATAAGCCATCAGTCGAGGAACCACAAGAGTTAGAGCTCAAGCCTTTGCCAAACCACCTGAAATATGCATACTTGAG
GGAGAATGACACCCTGCTGATTGATTCTTTTGTATTGAATTAA
Protein sequenceShow/hide protein sequence
MVKACPHNGIPECILMEVFYFDLNKATQQTADAVFLRGMLESSYNQIKATLDTMASNNEEWDKDDFGNRRGGRGRSDEGMDKNVVVALQGQMIAMNNLLKSMPILQVNAT
RSSMQSVNQIDDLGYVGRGGPHNTDTCPLNIKTLAFVRNDPYFNTYNPGWRNHLNFGWGGTGKKNQGRQGGQGDHRGEASGYHPRHHSNRPPHPHQEQQHTTTTPSTSSS
MENLISEYIRPQGSLPSNTEMPNQVGGSEKEKCQVVTLRSGRNLTIHDPKTKCRNSTSHSTTEIDSTKSLGLNYCEEEVSSQLLSLEEFLEEPKYITKEINVMSGERKSE
PLDLPTKGEKRNKPSVEEPQELELKPLPNHLKYAYLRENDTLLIDSFVLN