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PI0000871 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000871
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr05:11929583..11931073
RNA-Seq ExpressionPI0000871
SyntenyPI0000871
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61377.1 hypothetical protein Csa_006168 [Cucumis sativus]9.7e-1545.06Show/hide
Query:  PSPGNLAFNTGSHSIFIADDNFF--VIELGQNLDSRHPLALGFDEAKNRGGSLRR-SGVDIELTRNEKGNYENRVEVVGLDWIGLDAKTWKFQAKKTPAA
        PS G+LA      SI IA++ F+  + ELGQ++DS H LALGFD+AKN+G SL++   VDIELTR EKG YENRVEVVGLDWIG        +   T   
Subjt:  PSPGNLAFNTGSHSIFIADDNFF--VIELGQNLDSRHPLALGFDEAKNRGGSLRR-SGVDIELTRNEKGNYENRVEVVGLDWIGLDAKTWKFQAKKTPAA

Query:  YMEPGLLCSKFRLILKSFCGIFFYINQHPSLLFHFYSQTRFPFSSSSSSSPSSSSSRVSFFS
                     +L  F  +FF  +          S   FP SS+   + S SSSRVSFFS
Subjt:  YMEPGLLCSKFRLILKSFCGIFFYINQHPSLLFHFYSQTRFPFSSSSSSSPSSSSSRVSFFS
XP_038875603.1 RING-H2 finger protein ATL16-like [Benincasa hispida]5.4e-0556.36Show/hide
Query:  QAPSPGNLAFNTGSHSIFIADDNFFVIELGQNLDSRHPLALGFDEAKNRGGSLRR
        QAPSP +L  NTGSH I +AD+NF VIELG+NLD R   ALG  EA   G   ++
Subjt:  QAPSPGNLAFNTGSHSIFIADDNFFVIELGQNLDSRHPLALGFDEAKNRGGSLRR
TrEMBL top hitse value%identityAlignment
A0A0A0LKU7 Uncharacterized protein4.7e-1545.06Show/hide
Query:  PSPGNLAFNTGSHSIFIADDNFF--VIELGQNLDSRHPLALGFDEAKNRGGSLRR-SGVDIELTRNEKGNYENRVEVVGLDWIGLDAKTWKFQAKKTPAA
        PS G+LA      SI IA++ F+  + ELGQ++DS H LALGFD+AKN+G SL++   VDIELTR EKG YENRVEVVGLDWIG        +   T   
Subjt:  PSPGNLAFNTGSHSIFIADDNFF--VIELGQNLDSRHPLALGFDEAKNRGGSLRR-SGVDIELTRNEKGNYENRVEVVGLDWIGLDAKTWKFQAKKTPAA

Query:  YMEPGLLCSKFRLILKSFCGIFFYINQHPSLLFHFYSQTRFPFSSSSSSSPSSSSSRVSFFS
                     +L  F  +FF  +          S   FP SS+   + S SSSRVSFFS
Subjt:  YMEPGLLCSKFRLILKSFCGIFFYINQHPSLLFHFYSQTRFPFSSSSSSSPSSSSSRVSFFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAATCCGTCAAATCATGTTCCACACCTTCACAACCTCACTCTTCGTCTAAAAAATTGGCTCACATTTTCTCATATCAAGCCCCTTCCCCTGGAAATTTGGCCTT
CAATACAGGCAGTCATTCCATTTTCATAGCTGATGATAATTTCTTTGTGATTGAACTTGGTCAAAATCTAGATAGTCGTCATCCTTTGGCATTGGGATTCGACGAGGCAA
AGAATCGGGGAGGAAGTTTAAGAAGGTCAGGCGTAGATATTGAGTTGACGCGGAATGAGAAAGGAAATTACGAAAATAGGGTGGAGGTGGTTGGATTGGATTGGATTGGA
TTGGACGCAAAGACGTGGAAGTTTCAAGCGAAGAAAACTCCGGCTGCATATATGGAACCAGGTCTACTGTGCTCCAAATTCCGCCTTATTTTAAAGTCTTTTTGTGGAAT
CTTCTTCTACATTAACCAACACCCATCTCTTCTCTTCCATTTTTACTCTCAAACGCGCTTTCCTTTTTCGTCGTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCCAGGG
TTTCTTTCTTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAATCCGTCAAATCATGTTCCACACCTTCACAACCTCACTCTTCGTCTAAAAAATTGGCTCACATTTTCTCATATCAAGCCCCTTCCCCTGGAAATTTGGCCTT
CAATACAGGCAGTCATTCCATTTTCATAGCTGATGATAATTTCTTTGTGATTGAACTTGGTCAAAATCTAGATAGTCGTCATCCTTTGGCATTGGGATTCGACGAGGCAA
AGAATCGGGGAGGAAGTTTAAGAAGGTCAGGCGTAGATATTGAGTTGACGCGGAATGAGAAAGGAAATTACGAAAATAGGGTGGAGGTGGTTGGATTGGATTGGATTGGA
TTGGACGCAAAGACGTGGAAGTTTCAAGCGAAGAAAACTCCGGCTGCATATATGGAACCAGGTCTACTGTGCTCCAAATTCCGCCTTATTTTAAAGTCTTTTTGTGGAAT
CTTCTTCTACATTAACCAACACCCATCTCTTCTCTTCCATTTTTACTCTCAAACGCGCTTTCCTTTTTCGTCGTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCCAGGG
TTTCTTTCTTCTCTTGA
Protein sequenceShow/hide protein sequence
MGKSVKSCSTPSQPHSSSKKLAHIFSYQAPSPGNLAFNTGSHSIFIADDNFFVIELGQNLDSRHPLALGFDEAKNRGGSLRRSGVDIELTRNEKGNYENRVEVVGLDWIG
LDAKTWKFQAKKTPAAYMEPGLLCSKFRLILKSFCGIFFYINQHPSLLFHFYSQTRFPFSSSSSSSPSSSSSRVSFFS