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PI0000877 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000877
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr11:20760801..20761625
RNA-Seq ExpressionPI0000877
SyntenyPI0000877
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]8.0e-1651.65Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE
        L VV KFYA+  N  E+   +  K+  F+ EAIN LY+ P D ETP  + + +  KR A EALE IAW GA +++T TGKY LYPHQLT E
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE

KAA0050753.1 hypothetical protein E6C27_scaffold46449G00020 [Cucumis melo var. makuwa]2.1e-1650.55Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE
        L V+ KFY + LN  E+ V + GK++ F+ EAIN LYDLP D +TP Q  + +  KR AREAL+ I W G   ++TLT  Y LYPH+LTT+
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE

KAA0057357.1 hypothetical protein E6C27_scaffold280G002180 [Cucumis melo var. makuwa]6.5e-1853.85Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE
        L VV KFY + LN  E+ V + GK++ F+ EAIN LYDLP D ETP Q  + +  KR AREAL+ I W G   ++TLTG Y LYPH+LTT+
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]8.3e-1334.13Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------
        + VV KFY  K N  +  + I  +   F+ E IN LY+ PND E  GQ  V   TK +A+EAL+V+AWPG   EV  +  +YQLYPH  T          
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------

Query:  ----------------------------------------TEMRAPKGAMPFPSTIEALCVKAVPFL
                                                T M  PK AMPFPS +E LC+K +P L
Subjt:  ----------------------------------------TEMRAPKGAMPFPSTIEALCVKAVPFL

TYK05842.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-1642.11Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------
        + VV KFY  K N  +  + I  +   F+ E IN LY+ PND E  GQ  V   TK +A+EAL+V+AWPG   EV  +  +YQLYPH  T          
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------

Query:  ------TEMRAPKGAMPFPSTIEALCVKAVPFL
              T M  PK  MPFPS +E LC+K +P L
Subjt:  ------TEMRAPKGAMPFPSTIEALCVKAVPFL

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein3.9e-1651.65Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE
        L VV KFYA+  N  E+   +  K+  F+ EAIN LY+ P D ETP  + + +  KR A EALE IAW GA +++T TGKY LYPHQLT E
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE

A0A5A7U4E3 Uncharacterized protein1.0e-1650.55Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE
        L V+ KFY + LN  E+ V + GK++ F+ EAIN LYDLP D +TP Q  + +  KR AREAL+ I W G   ++TLT  Y LYPH+LTT+
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE

A0A5A7URT6 Uncharacterized protein3.2e-1853.85Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE
        L VV KFY + LN  E+ V + GK++ F+ EAIN LYDLP D ETP Q  + +  KR AREAL+ I W G   ++TLTG Y LYPH+LTT+
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTE

A0A5A7V6M5 Gag/pol protein4.0e-1334.13Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------
        + VV KFY  K N  +  + I  +   F+ E IN LY+ PND E  GQ  V   TK +A+EAL+V+AWPG   EV  +  +YQLYPH  T          
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------

Query:  ----------------------------------------TEMRAPKGAMPFPSTIEALCVKAVPFL
                                                T M  PK AMPFPS +E LC+K +P L
Subjt:  ----------------------------------------TEMRAPKGAMPFPSTIEALCVKAVPFL

A0A5D3C3P6 Gag/pol protein1.3e-1642.11Show/hide
Query:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------
        + VV KFY  K N  +  + I  +   F+ E IN LY+ PND E  GQ  V   TK +A+EAL+V+AWPG   EV  +  +YQLYPH  T          
Subjt:  LGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEV-TLTGKYQLYPHQLT----------

Query:  ------TEMRAPKGAMPFPSTIEALCVKAVPFL
              T M  PK  MPFPS +E LC+K +P L
Subjt:  ------TEMRAPKGAMPFPSTIEALCVKAVPFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCGTTCTTCAAAGGGCACACCAAGGTGAGTTAGGGGTAGTGGAGAAATTTTATGCGGCTAAGCTCAATGTTGAAGAGTTTAGCGTGCAAATCAGTGGAAAAAC
AGTGAGTTTCAGCGCGGAGGCCATCAACGCGTTATATGATTTGCCAAACGATGTTGAAACGCCAGGGCAAATATACGTAGATAGTCCTACGAAGAGGATGGCCCGTGAAG
CGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCTAACGGGGAAGTATCAGCTTTATCCACACCAGCTAACCACAGAGATGCGAGCTCCCAAAGGCGCC
ATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCGTTAAAGCTGTGCCATTCTTATCTGCCATCCAAACAATTCCAATACCAGGCAGCTTGTGTACTCAAATGGCTTTAAA
CCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTGGGCGACACACCTGAAGGCATGGCCCAAGCAGAACGCAAACAGAAATCCCCAGTCG
TTGCATCAACCCCCCCACCTAAAGCCAAAAAAGCAAGGGTTGATGTGGCGAAGCAGCCACCACCACTGAAAATTATCCACCCCTCATCCCGCCCAATAAAGCGAGCTCCC
TCATCAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCGTTCTTCAAAGGGCACACCAAGGTGAGTTAGGGGTAGTGGAGAAATTTTATGCGGCTAAGCTCAATGTTGAAGAGTTTAGCGTGCAAATCAGTGGAAAAAC
AGTGAGTTTCAGCGCGGAGGCCATCAACGCGTTATATGATTTGCCAAACGATGTTGAAACGCCAGGGCAAATATACGTAGATAGTCCTACGAAGAGGATGGCCCGTGAAG
CGTTGGAGGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCTAACGGGGAAGTATCAGCTTTATCCACACCAGCTAACCACAGAGATGCGAGCTCCCAAAGGCGCC
ATGCCCTTCCCTTCAACCATTGAGGCCCTTTGCGTTAAAGCTGTGCCATTCTTATCTGCCATCCAAACAATTCCAATACCAGGCAGCTTGTGTACTCAAATGGCTTTAAA
CCGCATGATTACTTTCCATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTGGGCGACACACCTGAAGGCATGGCCCAAGCAGAACGCAAACAGAAATCCCCAGTCG
TTGCATCAACCCCCCCACCTAAAGCCAAAAAAGCAAGGGTTGATGTGGCGAAGCAGCCACCACCACTGAAAATTATCCACCCCTCATCCCGCCCAATAAAGCGAGCTCCC
TCATCAGTCTAA
Protein sequenceShow/hide protein sequence
MEVVLQRAHQGELGVVEKFYAAKLNVEEFSVQISGKTVSFSAEAINALYDLPNDVETPGQIYVDSPTKRMAREALEVIAWPGAAWEVTLTGKYQLYPHQLTTEMRAPKGA
MPFPSTIEALCVKAVPFLSAIQTIPIPGSLCTQMALNRMITFHGHKEMERRAKTLGDTPEGMAQAERKQKSPVVASTPPPKAKKARVDVAKQPPPLKIIHPSSRPIKRAP
SSV