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PI0000888 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000888
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr12:14612661..14613378
RNA-Seq ExpressionPI0000888
SyntenyPI0000888
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050616.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]5.6e-1274.07Show/hide
Query:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE
        +S  SPSL+PSP+PS NNA G VSSSKP LP+KK+ R TKKTTST+WDHFTKLE
Subjt:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE

KAA0051113.1 gag-pol polyprotein [Cucumis melo var. makuwa]5.6e-1274.07Show/hide
Query:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE
        +S  SPSL+PSP+PS NNA G VSSSKP LP+KK+ R TKKTTST+WDHFTKLE
Subjt:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE

KAA0052351.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.5e-1251.49Show/hide
Query:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL
        DF LIS   + +  L VGL  R  ++  R V+  +   G        +S  SPSL+PSP+PS NNA G +SSSKP +P+KK+AR TKKTTST+WDHFTKL
Subjt:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL

Query:  E
        E
Subjt:  E

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]5.6e-1274.07Show/hide
Query:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE
        +S  SPSL+PSP+PS NNA G VSSSKP LP+KK+ R TKKTTST+WDHFTKLE
Subjt:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE

TYK01905.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.5e-1251.49Show/hide
Query:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL
        DF LIS   + +  L VGL  R  ++  R V+  +   G        +S  SPSL+PSP+PS NNA G +SSSKP +P+KK+AR TKKTTST+WDHFTKL
Subjt:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A5A7UFQ0 Zinc finger BED domain-containing protein RICESLEEPER 2-like7.2e-1351.49Show/hide
Query:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL
        DF LIS   + +  L VGL  R  ++  R V+  +   G        +S  SPSL+PSP+PS NNA G +SSSKP +P+KK+AR TKKTTST+WDHFTKL
Subjt:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL

Query:  E
        E
Subjt:  E

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.7e-1274.07Show/hide
Query:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE
        +S  SPSL+PSP+PS NNA G VSSSKP LP+KK+ R TKKTTST+WDHFTKLE
Subjt:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE

A0A5D3BRU1 Zinc finger BED domain-containing protein RICESLEEPER 2-like7.2e-1351.49Show/hide
Query:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL
        DF LIS   + +  L VGL  R  ++  R V+  +   G        +S  SPSL+PSP+PS NNA G +SSSKP +P+KK+AR TKKTTST+WDHFTKL
Subjt:  DFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKL

Query:  E
        E
Subjt:  E

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.7e-1274.07Show/hide
Query:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE
        +S  SPSL+PSP+PS NNA G VSSSKP LP+KK+ R TKKTTST+WDHFTKLE
Subjt:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE

A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.7e-1274.07Show/hide
Query:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE
        +S  SPSL+PSP+PS NNA G VSSSKP LP+KK+ R TKKTTST+WDHFTKLE
Subjt:  NSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCGACGACTTCAGTCTCATATCTGTTCATCTCAACTCCCTCTCACGTCTCATCGTCGGTCTCCCTCTCAGGTCTCATCGCTACCGCTGCCGGCTTGTCTCTCA
ATCTCAAGTCTCATTTGGGTTGACAAAGATCTGGAATATTGATAACAGTAGCCCTAGTCCTAGTCTTAATCCTAGTCCTTCTCCTTCCATTAATAACGCAATGGGAATTG
TGAGTTCGAGTAAACCACTACTACCCAATAAAAAGAGAGCTAGAGTCACTAAGAAGACAACTTCCACTATATGGGATCACTTCACAAAGTTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCGACGACTTCAGTCTCATATCTGTTCATCTCAACTCCCTCTCACGTCTCATCGTCGGTCTCCCTCTCAGGTCTCATCGCTACCGCTGCCGGCTTGTCTCTCA
ATCTCAAGTCTCATTTGGGTTGACAAAGATCTGGAATATTGATAACAGTAGCCCTAGTCCTAGTCTTAATCCTAGTCCTTCTCCTTCCATTAATAACGCAATGGGAATTG
TGAGTTCGAGTAAACCACTACTACCCAATAAAAAGAGAGCTAGAGTCACTAAGAAGACAACTTCCACTATATGGGATCACTTCACAAAGTTGGAATAG
Protein sequenceShow/hide protein sequence
MASDDFSLISVHLNSLSRLIVGLPLRSHRYRCRLVSQSQVSFGLTKIWNIDNSSPSPSLNPSPSPSINNAMGIVSSSKPLLPNKKRARVTKKTTSTIWDHFTKLE