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PI0000894 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000894
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLeucine-rich repeat extensin-like protein 4
Genome locationchr05:866343..866645
RNA-Seq ExpressionPI0000894
SyntenyPI0000894
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061563.1 leucine-rich repeat extensin-like protein 4 [Cucumis melo var. makuwa]4.2e-0994.44Show/hide
Query:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
        AHCHQSMEFRTL LHLHPSIDSFEKFS+SNLTSTQP
Subjt:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
TYK10709.1 leucine-rich repeat extensin-like protein 4 [Cucumis melo var. makuwa]4.2e-0994.44Show/hide
Query:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
        AHCHQSMEFRTL LHLHPSIDSFEKFS+SNLTSTQP
Subjt:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
TrEMBL top hitse value%identityAlignment
A0A5A7V0A1 Leucine-rich repeat extensin-like protein 42.1e-0994.44Show/hide
Query:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
        AHCHQSMEFRTL LHLHPSIDSFEKFS+SNLTSTQP
Subjt:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
A0A5D3CKG5 Leucine-rich repeat extensin-like protein 42.1e-0994.44Show/hide
Query:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
        AHCHQSMEFRTL LHLHPSIDSFEKFS+SNLTSTQP
Subjt:  AHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCCCACCACCACCATCACCCTCCCCACCTCCGCCCATCCAATACCTTCCTCCGCCGTCTCCTTCACCACCCCCACCCCCAGTTTACCATTCACCTCCTCCGCCG
GTTTATTACTCTCCACCACCACCACCATCACCATCGCCACCTCCGCCACCTGCATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTC
GTACGCTTCTCCTCCACCTCCACCCTTCTATTGATTCTTTTGAGAAATTTTCCTCCTCTAACCTTACCTCAACTCAACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCCCCACCACCACCATCACCCTCCCCACCTCCGCCCATCCAATACCTTCCTCCGCCGTCTCCTTCACCACCCCCACCCCCAGTTTACCATTCACCTCCTCCGCCG
GTTTATTACTCTCCACCACCACCACCATCACCATCGCCACCTCCGCCACCTGCATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTC
GTACGCTTCTCCTCCACCTCCACCCTTCTATTGATTCTTTTGAGAAATTTTCCTCCTCTAACCTTACCTCAACTCAACCATAG
Protein sequenceShow/hide protein sequence
MNPHHHHHPPHLRPSNTFLRRLLHHPHPQFTIHLLRRFITLHHHHHHHRHLRHLHPHHHHLYTKAHCHQSMEFRTLLLHLHPSIDSFEKFSSSNLTSTQP