CuGenDBv2

Gene ID	PI0000903
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Cytochrome c-type biogenesis protein
Genome location	chr01:27754733..27757662
RNA-Seq Expression	PI0000903
Synteny	PI0000903
Gene Ontology terms	GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0032991 - protein-containing complex (cellular component) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR005616 - CcmH/CycL/Ccl2/NrfF family IPR038297 - CcmH/CycL/Ccl2/NrfF domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004149299.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus]

3.0e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME +E+A+++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

XP_008452301.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo]

5.1e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME +E+A+++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

XP_022152937.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia]

7.9e-13

87.5

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME N++AV++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

XP_022953979.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata]

6.6e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME + +AV++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

XP_038904619.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]

1.3e-12

87.5

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME +E+AV++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L351 Cytochrome c-type biogenesis protein

1.4e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME +E+A+++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

A0A1S4DZT6 Cytochrome c-type biogenesis protein

2.5e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME +E+A+++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

A0A5A7TY95 Cytochrome c-type biogenesis protein

2.5e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME +E+A+++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

A0A6J1DHL6 Cytochrome c-type biogenesis protein

3.8e-13

87.5

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME N++AV++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

A0A6J1JTI4 Cytochrome c-type biogenesis protein

3.2e-12

85.42

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME + +AV++TQLVEARA+NISHNVRCIECGSQSIEDSQADIAILLRK
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

SwissProt top hits

e value

%identity

Alignment

B8AFK5 Cytochrome c-type biogenesis CcmH-like mitochondrial protein

1.2e-11

77.27

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Query:  ENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        E  V++ Q++E+RA+NISHNVRC ECGSQSIEDSQADIAILLRK
Subjt:  ENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

Q6K7S7 Cytochrome c-type biogenesis CcmH-like mitochondrial protein

1.2e-11

77.27

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Query:  ENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        E  V++ Q++E+RA+NISHNVRC ECGSQSIEDSQADIAILLRK
Subjt:  ENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

Q9XI46 Cytochrome c-type biogenesis CcmH-like mitochondrial protein

2.6e-11

68.75

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME+ +   ++ Q+++ARA+NISHNVRC ECGSQSIEDSQADIAILLR+
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

Arabidopsis top hits

e value

%identity

Alignment

AT1G15220.1 cytochrome c biogenesis protein family

1.9e-12

68.75

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME+ +   ++ Q+++ARA+NISHNVRC ECGSQSIEDSQADIAILLR+
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

AT1G15220.2 cytochrome c biogenesis protein family

1.9e-12

68.75

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Query:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK
        ME+ +   ++ Q+++ARA+NISHNVRC ECGSQSIEDSQADIAILLR+
Subjt:  MERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRK

Sequences

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CDS sequence

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ATGTGGAAAACCGTTCCAGCCGCTAAAAATATATATACTAAAATCACTATTTTTGTTAAAATCTGTGTTGGACTAGTTGGAGAGCAGTTTCAGTGCAGTCTGGTCAAAAC
TGAGGTGTCAGTGTCTAAAATGGAGAGAAATGAGAATGCTGTTGAAAGAACGCAGCTGGTGGAAGCTCGAGCAAAAAATATTAGTCACAATGTTAGGTGCATTGAGTGTG
GTAGTCAATCCATTGAAGATTCGCAAGCAGATATTGCGATTCTCCTCAGAAAGAATATGGCTATCACCGGTCTAGACATGTATCAAGCTGCAGTTAACCTGCATACTAGT
TATGGTGACAATGCACAATCCGATCAAGTCAAATTCTCAGGTGCAACCAAGTATCAAGCTAACTTCTCTGTTGGCCTCATACAAACTTACGGTGAAAATCTGCTCAACCC
AACTTCTCTGGTCCAACCAAGTATCAAGCTAGCCCAAATCAAATACTAG

mRNA sequence

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Protein sequence

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MWKTVPAAKNIYTKITIFVKICVGLVGEQFQCSLVKTEVSVSKMERNENAVERTQLVEARAKNISHNVRCIECGSQSIEDSQADIAILLRKNMAITGLDMYQAAVNLHTS
YGDNAQSDQVKFSGATKYQANFSVGLIQTYGENLLNPTSLVQPSIKLAQIKY

PI0000903 (gene) of Melon (PI 482460) v1 genome