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PI0000928 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000928
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr09:21837499..21837987
RNA-Seq ExpressionPI0000928
SyntenyPI0000928
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032570.1 protein SAND [Cucumis melo var. makuwa]1.8e-4055.41Show/hide
Query:  KFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEAL
        +FFWEGN   KLN+L KW  +TKS  DG LG   L+IRN+ALL+KW WRF+             IH    F+WHTSGKE+ SLRS WISISR+ RK+E L
Subjt:  KFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEAL

Query:  ATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS
        A F++GKG R  FW DPW+++  L  K+PRL RIAL PKGS+  +WDS
Subjt:  ATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS

KAA0048809.1 hypothetical protein E6C27_scaffold171G00220 [Cucumis melo var. makuwa]5.7e-3471.43Show/hide
Query:  LALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPK
        +ALLSKWGWRF+             IH  HPFLWHTSGKENLSLRS  ISISREW KIEALATFRIG GSR FFW DPWLD+ PLNSK+ RL RI LLPK
Subjt:  LALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPK

Query:  GSIFE
        GSI E
Subjt:  GSIFE

TYK14440.1 uncharacterized protein E5676_scaffold186G00990 [Cucumis melo var. makuwa]7.2e-3746.3Show/hide
Query:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL
        +P +V+  LEK++R FFWEGN+G K+NH   W K+T SL DG LG   +R +++ALL+KWGWR++             IHG   F W T  K   SLRS 
Subjt:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL

Query:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS
        W+ ISREW K+E LA F++G G R  FW D W    PL +++    RI+LLP  S+  HWDS
Subjt:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS

TYK28319.1 uncharacterized protein E5676_scaffold600G001450 [Cucumis melo var. makuwa]8.5e-3860.74Show/hide
Query:  KWSKITKSLRDGGL---GPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFF
        KW         GGL       +   N++     GWRF+             IHGIHPFLWHTSGKEN  LRS WISISREWRKIEALATFRIG GSR +F
Subjt:  KWSKITKSLRDGGL---GPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFF

Query:  WTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS
        WTDPWLDN PLN+K PRLS IALLPKGSI +HWDS
Subjt:  WTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]1.4e-3553.62Show/hide
Query:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL
        +P  V   +E+ M+ FFWEG+ GGK+NHL KW  +TK+  DGGLG   LR RNLA L+KWGWR +             IH    F WHTSGK +L+LRS 
Subjt:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL

Query:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPL
        WISISR W K+EALA +++G GSR  F +DPW DNTPL
Subjt:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPL

TrEMBL top hitse value%identityAlignment
A0A5A7SP09 Vacuolar fusion protein MON1 homolog8.8e-4155.41Show/hide
Query:  KFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEAL
        +FFWEGN   KLN+L KW  +TKS  DG LG   L+IRN+ALL+KW WRF+             IH    F+WHTSGKE+ SLRS WISISR+ RK+E L
Subjt:  KFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEAL

Query:  ATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS
        A F++GKG R  FW DPW+++  L  K+PRL RIAL PKGS+  +WDS
Subjt:  ATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS

A0A5A7UKS5 Uncharacterized protein9.2e-3048.57Show/hide
Query:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL
        MP  V +  E+I+R FFWEG  G K+NHL  W  +T+ L DGG      + RN+ALL KWGWR++             IHG   F WHT+GKE   L+S 
Subjt:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL

Query:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNS
        W SIS  W KI+ALATFR+G G R  FW DPW    PL S
Subjt:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNS

A0A5D3CSP2 Uncharacterized protein3.5e-3746.3Show/hide
Query:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL
        +P +V+  LEK++R FFWEGN+G K+NH   W K+T SL DG LG   +R +++ALL+KWGWR++             IHG   F W T  K   SLRS 
Subjt:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSL

Query:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS
        W+ ISREW K+E LA F++G G R  FW D W    PL +++    RI+LLP  S+  HWDS
Subjt:  WISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS

A0A5D3DAY4 Uncharacterized protein2.8e-3471.43Show/hide
Query:  LALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPK
        +ALLSKWGWRF+             IH  HPFLWHTSGKENLSLRS  ISISREW KIEALATFRIG GSR FFW DPWLD+ PLNSK+ RL RI LLPK
Subjt:  LALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRIALLPK

Query:  GSIFE
        GSI E
Subjt:  GSIFE

A0A5D3DY86 Uncharacterized protein4.1e-3860.74Show/hide
Query:  KWSKITKSLRDGGL---GPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFF
        KW         GGL       +   N++     GWRF+             IHGIHPFLWHTSGKEN  LRS WISISREWRKIEALATFRIG GSR +F
Subjt:  KWSKITKSLRDGGL---GPSDLRIRNLALLSKWGWRFI-------------IHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGSRAFF

Query:  WTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS
        WTDPWLDN PLN+K PRLS IALLPKGSI +HWDS
Subjt:  WTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.1e-1130.94Show/hide
Query:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLWHTSGKENL-------------SLRSL
        +P S+ N L+++ R F W      K  HL KWSK+    ++GGLG    +  N AL+SK GWR +      +      K ++             S  S 
Subjt:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLWHTSGKENL-------------SLRSL

Query:  WISISREWRKIEALATFRI-GKGSRAFFWTDPWLDNTPL
        W SI+   R + +     I G G +  FWTD W+   PL
Subjt:  WISISREWRKIEALATFRI-GKGSRAFFWTDPWLDNTPL

P93295 Uncharacterized mitochondrial protein AtMg003102.9e-0434.85Show/hide
Query:  LEKIMRKFFWEG-NNGGKLNHLAKWSKITKSLR-DGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLW---------HTSGKE-NLSLRS--LWISISRE
        L   M +F+W    N  K++ +A W K+ KS   DGGLG  DL   N ALL+K  +R IIH  H  L          H+S  E ++  R    W SI   
Subjt:  LEKIMRKFFWEG-NNGGKLNHLAKWSKITKSLR-DGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLW---------HTSGKE-NLSLRS--LWISISRE

Query:  WRKIEALATFRIGKGSRAFFWTDPW-LDNTPL
           +       IG G     W D W +D TPL
Subjt:  WRKIEALATFRIGKGSRAFFWTDPW-LDNTPL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein8.8e-0925.34Show/hide
Query:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFIIHG-------IHPFLWHTSGKENLSLRS----LWI
        +P +V   +  ++  F+W      K  H   W  ++    +GG+G  D+   NLALL K  WR +               +H S   N  L S    +W 
Subjt:  MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFIIHG-------IHPFLWHTSGKENLSLRS----LWI

Query:  SISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRI
        SI      +   A   +G G     W   WLD+ P ++   R+ R+
Subjt:  SISREWRKIEALATFRIGKGSRAFFWTDPWLDNTPLNSKYPRLSRI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.0e-0534.85Show/hide
Query:  LEKIMRKFFWEG-NNGGKLNHLAKWSKITKSLR-DGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLW---------HTSGKE-NLSLRS--LWISISRE
        L   M +F+W    N  K++ +A W K+ KS   DGGLG  DL   N ALL+K  +R IIH  H  L          H+S  E ++  R    W SI   
Subjt:  LEKIMRKFFWEG-NNGGKLNHLAKWSKITKSLR-DGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLW---------HTSGKE-NLSLRS--LWISISRE

Query:  WRKIEALATFRIGKGSRAFFWTDPW-LDNTPL
           +       IG G     W D W +D TPL
Subjt:  WRKIEALATFRIGKGSRAFFWTDPW-LDNTPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTTCAGTTTCCAATAATTTGGAGAAAATTATGAGAAAATTTTTCTGGGAAGGTAATAATGGGGGAAAGCTGAACCACTTGGCTAAATGGTCTAAAATCACCAA
AAGCCTAAGAGATGGGGGCCTAGGCCCAAGTGATTTGAGAATAAGAAATTTGGCTCTTTTATCAAAATGGGGATGGAGATTCATTATTCATGGTATCCACCCCTTCCTTT
GGCACACTAGCGGAAAGGAGAATTTGAGTTTGAGAAGCCTGTGGATTAGTATTTCAAGAGAATGGCGCAAGATTGAAGCATTAGCCACTTTTAGAATTGGTAAGGGCAGC
AGAGCCTTTTTTTGGACTGATCCATGGTTGGATAATACTCCCCTAAATAGCAAGTACCCTAGATTATCTCGCATTGCCCTCTTGCCTAAAGGGTCAATTTTCGAGCACTG
GGATAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATTTCAGTTTCCAATAATTTGGAGAAAATTATGAGAAAATTTTTCTGGGAAGGTAATAATGGGGGAAAGCTGAACCACTTGGCTAAATGGTCTAAAATCACCAA
AAGCCTAAGAGATGGGGGCCTAGGCCCAAGTGATTTGAGAATAAGAAATTTGGCTCTTTTATCAAAATGGGGATGGAGATTCATTATTCATGGTATCCACCCCTTCCTTT
GGCACACTAGCGGAAAGGAGAATTTGAGTTTGAGAAGCCTGTGGATTAGTATTTCAAGAGAATGGCGCAAGATTGAAGCATTAGCCACTTTTAGAATTGGTAAGGGCAGC
AGAGCCTTTTTTTGGACTGATCCATGGTTGGATAATACTCCCCTAAATAGCAAGTACCCTAGATTATCTCGCATTGCCCTCTTGCCTAAAGGGTCAATTTTCGAGCACTG
GGATAGCTAA
Protein sequenceShow/hide protein sequence
MPISVSNNLEKIMRKFFWEGNNGGKLNHLAKWSKITKSLRDGGLGPSDLRIRNLALLSKWGWRFIIHGIHPFLWHTSGKENLSLRSLWISISREWRKIEALATFRIGKGS
RAFFWTDPWLDNTPLNSKYPRLSRIALLPKGSIFEHWDS