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PI0000937 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000937
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr12:16756917..16757114
RNA-Seq ExpressionPI0000937
SyntenyPI0000937
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.1e-1886.15Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MADV  E AMAEMERKINLLMK V+ERDHEIA L+EQMQT ETAESSQTPVVKVDDK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.1e-1886.15Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MADV  E AMAEMERKINLLMK V+ERDHEIA L+EQMQT ETAESSQTPVVKVDDK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.1e-1886.15Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MADV  E AMAEMERKINLLMK V+ERDHEIA L+EQMQT ETAESSQTPVVKVDDK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.1e-1886.15Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MADV  E AMAEMERKINLLMK V+ERDHEIA L+EQMQT ETAESSQTPVVKVDDK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.1e-1886.15Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MADV  E AMAEMERKINLLMK V+ERDHEIA L+EQMQT ETAESSQTPVVKVDDK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

TrEMBL top hitse value%identityAlignment
A0A5A7TYE9 Ty3-gypsy retrotransposon protein2.7e-1883.08Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MAD+T EAAMAEMERKIN LMK VEERDHEI  LREQM+T ETAESSQTPVVK  DK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

A0A5A7UF60 Ty3-gypsy retrotransposon protein4.6e-1883.08Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MAD+T EAAMAEME+KIN LMKAVEERDHEI  LREQM+T ETAESSQTPVVK  DK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

A0A5A7V6X2 Ty3-gypsy retrotransposon protein2.7e-1881.54Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        M DVT EA MAEMERKIN LMK VEERDHEIAVL++QM+ CETAESSQTPVVK  DK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

A0A5A7VDN4 Ty3-gypsy retrotransposon protein2.7e-1883.08Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MAD+T EAAMAEMERKIN LMKAVEERDHEI  LREQM+T ETAESSQTPVVK  DK KNVVQ+N
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.7e-1883.08Show/hide
Query:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN
        MAD+T EAAMAEMERKIN LMKAVEERDHEI  LREQM+T ETAESSQTP+VK  DK KNVVQEN
Subjt:  MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATGTAACGGGTGAGGCTGCCATGGCAGAGATGGAGAGGAAAATCAATCTCCTGATGAAAGCTGTCGAGGAGCGAGACCACGAAATTGCAGTTTTGAGAGAGCA
AATGCAGACTTGTGAAACTGCTGAGTCGAGTCAAACTCCTGTTGTCAAAGTCGATGACAAATGGAAGAATGTGGTGCAAGAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATGTAACGGGTGAGGCTGCCATGGCAGAGATGGAGAGGAAAATCAATCTCCTGATGAAAGCTGTCGAGGAGCGAGACCACGAAATTGCAGTTTTGAGAGAGCA
AATGCAGACTTGTGAAACTGCTGAGTCGAGTCAAACTCCTGTTGTCAAAGTCGATGACAAATGGAAGAATGTGGTGCAAGAAAACTAA
Protein sequenceShow/hide protein sequence
MADVTGEAAMAEMERKINLLMKAVEERDHEIAVLREQMQTCETAESSQTPVVKVDDKWKNVVQEN