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PI0000940 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000940
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationchr07:5208988..5210377
RNA-Seq ExpressionPI0000940
SyntenyPI0000940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149756.1 arabinogalactan protein 41 [Cucumis sativus]3.5e-26100Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

XP_008451971.1 PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]6.0e-2697.14Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]5.1e-2588.73Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        MAVSR+SFG +AA ALIFAIFLPVAHPHSL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADLSN+F
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]3.3e-2488.73Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+F
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]5.1e-2591.55Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        MAVS +SFG LAA ALIFAIFLPVA PHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSN F
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

TrEMBL top hitse value%identityAlignment
A0A0A0KZS8 Uncharacterized protein1.7e-26100Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
        MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADL

A0A1S3BS55 arabinogalactan peptide 22-like2.9e-2697.14Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

A0A5D3CYF3 Arabinogalactan peptide 22-like2.9e-2697.14Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        MAVSRSSF LLAATALIFAIFLPVAHP SLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

A0A6J1C4C2 arabinogalactan peptide 22-like2.5e-2588.73Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        MAVSR+SFG +AA ALIFAIFLPVAHPHSL PAPAP+SDGTSIDQGIAYVLM+VALALTYLIHNADLSN+F
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

A0A6J1ETC6 arabinogalactan peptide 22-like1.6e-2488.73Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        MAVSR+SFG +AA ALIFAIFLPVA P SLAPAPAPTSDGTSIDQGIAYVLM+VALALTYLIHNADLSN+F
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 161.5e-1461.76Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+++
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

Q8L9T8 Arabinogalactan protein 413.5e-1669.84Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  FG+    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9FK16 Arabinogalactan protein 223.2e-1466.67Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +    +LA   +I  I LP+A  HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

Q9M373 Arabinogalactan protein 202.2e-1562.69Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S++
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 161.0e-1561.76Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF
        SR+S    A  + +FA+ L +A   SLAPAPAPTSDGTSIDQGIAY+LM+VAL LTYLIH  D S+++
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF

AT3G61640.1 arabinogalactan protein 201.6e-1662.69Show/hide
Query:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN
        SR+S  ++A  A +FA+  P A   SLAPAP+PTSDGTSIDQGIAY+LM+VAL LTYLIH  D S++
Subjt:  SRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNN

AT5G24105.1 arabinogalactan protein 412.5e-1769.84Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        M+ SR  FG+    ++IFAI LP+AH  S APAPAPTSDGT+IDQGIAYVLM+VAL LTYLIH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH

AT5G53250.1 arabinogalactan protein 222.3e-1566.67Show/hide
Query:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH
        MA  +    +LA   +I  I LP+A  HS +PAPAPTSDGTSIDQGIAYVLMMVALALTY IH
Subjt:  MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCTAGGTCGTCTTTTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCATTCCTTGGCTCCAGCACCCGCTCCCAC
CAGCGATGGGACATCCATAGATCAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAACTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAAGATTTGATTTCCTCCGTCTCTCTCTCCCATCGCTAAACACTTCCTCTGTTTCCGTTCAGAGATTTCTTCTTCATTTCGCCTTTCGAGGAGGGAAAGAGAGATTCCTT
TCTTTCTCTCTCTCTGCGATCCTCTTCAAGCCATAGAAGCCCACAACCATCGCAGAGGGAGATCCTCCACACCACCATTCCCACTCCAATGGCGGTTTCTAGGTCGTCTT
TTGGACTTTTGGCTGCCACTGCCCTCATCTTTGCCATCTTCTTGCCCGTTGCTCACCCTCATTCCTTGGCTCCAGCACCCGCTCCCACCAGCGATGGGACATCCATAGAT
CAAGGAATAGCTTATGTATTGATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCAAACAACTTCTAAAAGATTTGTATCAAAGCATTTGTAGG
ACATCTTTGATTAAAGGGAGGGAAAGGAATTTAGTTAGAAATTAATGCAAATGGGGTTTTTGTGGGAATTTGATTCTTTTTTGCACATTGTAATTCCTTTGGAACCCTCT
TTTGATCAAAGGAGAAGGGAATTTAGTTAGAAATGCAAATGGGTTTTGAGGGATTTTATTACCATTTTTTTTTAATTTAAAAAGTAGTTCATTTGGGTGTTTCTGTTTTT
TGGTCTTTATTTATAATGATGAGTCTGTTTGTGTGGTCTCTTTGTATTGCTATGTACAGTGTCCTAATTTGGAATGAGATTTATTGGGGTTTCCCTATTTTTCTTTA
Protein sequenceShow/hide protein sequence
MAVSRSSFGLLAATALIFAIFLPVAHPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNNF