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PI0000943 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000943
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionF-box protein At3g62230
Genome locationchr05:6141907..6142346
RNA-Seq ExpressionPI0000943
SyntenyPI0000943
Gene Ontology termsNA
InterPro domainsIPR006566 - FBD domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651682.1 hypothetical protein Csa_021280 [Cucumis sativus]2.5e-4493.75Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS
        DYEPPFPMDIGSFW TNMILI CLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSI +DSHDI NTQIY EKAQILKTIKPASKKIHIHIS
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS

XP_008460240.1 PREDICTED: F-box protein At3g62230 [Cucumis melo]1.1e-4494.79Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS
        DYEPPFPMDIG+FWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLS+AVDSHDI +TQIYIEKAQILKTIKPASKKI IHIS
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS

XP_011650125.1 F-box protein At3g62230 [Cucumis sativus]2.5e-4493.75Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS
        DYEPPFPMDIGSFW TNMILI CLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSI +DSHDI NTQIY EKAQILKTIKPASKKIHIHIS
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS

XP_022149837.1 F-box protein At3g62230-like [Momordica charantia]3.2e-3170.53Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHI
        +YEPPFPMDI SFW TNM++I CLS+SLETVE K FTGK HEI FLAYL+HYG+L+K LSI VDS DI N Q+Y  +AQ+LK+IKPAS  I IHI
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHI

XP_038889302.1 F-box protein At3g62230-like [Benincasa hispida]9.6e-3678.12Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS
        DYEPPF MDI  FW TNM+LI CLS SLETVEVKGF GKQHEI FL +L+HYG+++KTLS+AVDSHDI N QIYIEKAQIL TIKPASK I IHIS
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS

TrEMBL top hitse value%identityAlignment
A0A0A0LGV7 FBD domain-containing protein2.6e-3993.26Show/hide
Query:  MDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS
        MDIGSFW TNMILI CLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSI +DSHDI NTQIY EKAQILKTIKPASKKIHIHIS
Subjt:  MDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS

A0A1S3CBL3 F-box protein At3g622305.5e-4594.79Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS
        DYEPPFPMDIG+FWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLS+AVDSHDI +TQIYIEKAQILKTIKPASKKI IHIS
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS

A0A6J1D927 F-box protein At3g62230-like1.6e-3170.53Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHI
        +YEPPFPMDI SFW TNM++I CLS+SLETVE K FTGK HEI FLAYL+HYG+L+K LSI VDS DI N Q+Y  +AQ+LK+IKPAS  I IHI
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHI

A0A6J1ET07 F-box protein At3g62230-like3.1e-2457.29Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHD-IGNTQIYIEKAQILKTIKPASKKIHIHI
        +YEPPF +D+  FW TNM ++ CLS SLE V+ +GFTG  +EI FLAYLIHYG+ ++ + +AVDS D   NTQIY  KAQ+L TIKPAS+ + +HI
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHD-IGNTQIYIEKAQILKTIKPASKKIHIHI

A0A6J1KEB0 putative F-box/LRR-repeat protein At1g564001.1e-2459.38Show/hide
Query:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHD-IGNTQIYIEKAQILKTIKPASKKIHIHI
        +YEPPF +DI  FW TNM ++ CLS SLE V+ +GFTG  +EI FLAYLIHY +L++ + +AVDS D   NTQIY  KAQ+L TIKPAS+ + IHI
Subjt:  DYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHD-IGNTQIYIEKAQILKTIKPASKKIHIHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCTCTAAATCTGTGTAATATTTGGGATTATGAACCACCATTTCCAATGGACATAGGCAGCTTTTGGGTCACAAATATGATACTCATAAACTGCTTATCAACATC
TCTTGAGACAGTGGAAGTGAAGGGGTTCACAGGGAAGCAACATGAAATCCCATTTTTGGCTTATCTTATTCACTATGGTAAGCTTATAAAAACCCTATCTATTGCTGTTG
ATTCTCATGATATTGGAAACACTCAAATCTATATTGAAAAAGCTCAGATTCTCAAGACCATCAAGCCAGCCTCTAAGAAAATTCACATTCATATCAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACCTCTAAATCTGTGTAATATTTGGGATTATGAACCACCATTTCCAATGGACATAGGCAGCTTTTGGGTCACAAATATGATACTCATAAACTGCTTATCAACATC
TCTTGAGACAGTGGAAGTGAAGGGGTTCACAGGGAAGCAACATGAAATCCCATTTTTGGCTTATCTTATTCACTATGGTAAGCTTATAAAAACCCTATCTATTGCTGTTG
ATTCTCATGATATTGGAAACACTCAAATCTATATTGAAAAAGCTCAGATTCTCAAGACCATCAAGCCAGCCTCTAAGAAAATTCACATTCATATCAGCTGA
Protein sequenceShow/hide protein sequence
MPPLNLCNIWDYEPPFPMDIGSFWVTNMILINCLSTSLETVEVKGFTGKQHEIPFLAYLIHYGKLIKTLSIAVDSHDIGNTQIYIEKAQILKTIKPASKKIHIHIS