; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0000965 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000965
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr04:25480553..25481457
RNA-Seq ExpressionPI0000965
SyntenyPI0000965
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]3.0e-8258.28Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DTH  E+ A +IPNE+SWE VSQ SE FQLES   WPKKLEVPL KTCQL F+NNNLE+LK LWESL  + R KF KAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA
            +P L CFTFN FDLT TIEEYQALISL VD GNK+YIY R                    KKQMKTKEGRNCIPINYLINLA  CL GK  LS IA
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA

Query:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS
        LCIY T+IFPRIKGYVEE+VVKIF                                 S APMLFIWI++HL YPNNFGY QIKFNSPWN  RNTIRE NS
Subjt:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS

Query:  AH
        AH
Subjt:  AH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.1e-6554.98Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DTH  E+ AQ+IPNE+SWE VSQ SE FQL+S + WPKKLEVPL KTCQL F+NNNLE+LK LWESL  + R +FTKAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA
            +P L CFTFN FDLT TIEEYQALISL VD GN +YIYDR                    KKQMKTKEGRNCIPINYLINLA  CL  K  LS IA
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA

Query:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHL
        LCIY T+IFPRIKGYVEE+VVKIF                                 S APMLFIWI++HL
Subjt:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHL

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]5.1e-8257.95Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DTH  E+ AQ+IPNE+SW+ VSQ SE FQLES   WPKKLEVPL KTCQLEF+NNNLE+LK LWESL  + R +FTKAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA
            +P L  FTFN FDLT TIEEYQALISL VD GNK+YIYDR                    KK MKTKEGRNCIPINYLINLA  CL GK  LS IA
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA

Query:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS
        LCIY T+IFPRIKGYVEE+VVKIF                                 S APMLFIWI++HL YPNNFGY QIKF+SPWN  RNTIRE NS
Subjt:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS

Query:  AH
        AH
Subjt:  AH

TYK02649.1 hypothetical protein E5676_scaffold280G00610 [Cucumis melo var. makuwa]8.5e-3759.31Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DT+ FE   Q+IPNE+ WE VSQ SE FQLES   W KKLEV L KTCQL F+NNNLE+LK LWE+L  +HR++FTKAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDRK
            +P L CFTFN FDLT TIEEYQALISL VD  NK YIYDRK
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDRK

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.7e-4558.51Show/hide
Query:  MFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIALCIYKTIIFPRIKG
        MFDLT TIEEY+ALISL +D GNK+YIYDR                    KKQ+K KEGRNCIPINYLINLA  CL  K  LS IALCIY TIIFPRIKG
Subjt:  MFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIALCIYKTIIFPRIKG

Query:  YVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNSAH
        YVEE+VVKIF                                 S APMLFIWI++HL YPNNFGY QIKF+SPWNN RNTIRE NSAH
Subjt:  YVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNSAH

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase1.4e-8258.28Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DTH  E+ A +IPNE+SWE VSQ SE FQLES   WPKKLEVPL KTCQL F+NNNLE+LK LWESL  + R KF KAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA
            +P L CFTFN FDLT TIEEYQALISL VD GNK+YIY R                    KKQMKTKEGRNCIPINYLINLA  CL GK  LS IA
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA

Query:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS
        LCIY T+IFPRIKGYVEE+VVKIF                                 S APMLFIWI++HL YPNNFGY QIKFNSPWN  RNTIRE NS
Subjt:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS

Query:  AH
        AH
Subjt:  AH

A0A5A7TXA1 Glial fibrillary acidic protein-like5.5e-6654.98Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DTH  E+ AQ+IPNE+SWE VSQ SE FQL+S + WPKKLEVPL KTCQL F+NNNLE+LK LWESL  + R +FTKAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA
            +P L CFTFN FDLT TIEEYQALISL VD GN +YIYDR                    KKQMKTKEGRNCIPINYLINLA  CL  K  LS IA
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA

Query:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHL
        LCIY T+IFPRIKGYVEE+VVKIF                                 S APMLFIWI++HL
Subjt:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHL

A0A5A7VHI3 Uncharacterized protein2.5e-8257.95Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DTH  E+ AQ+IPNE+SW+ VSQ SE FQLES   WPKKLEVPL KTCQLEF+NNNLE+LK LWESL  + R +FTKAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA
            +P L  FTFN FDLT TIEEYQALISL VD GNK+YIYDR                    KK MKTKEGRNCIPINYLINLA  CL GK  LS IA
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIA

Query:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS
        LCIY T+IFPRIKGYVEE+VVKIF                                 S APMLFIWI++HL YPNNFGY QIKF+SPWN  RNTIRE NS
Subjt:  LCIYKTIIFPRIKGYVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNS

Query:  AH
        AH
Subjt:  AH

A0A5D3BWX8 Uncharacterized protein4.1e-3759.31Show/hide
Query:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------
        M+DT+ FE   Q+IPNE+ WE VSQ SE FQLES   W KKLEV L KTCQL F+NNNLE+LK LWE+L  +HR++FTKAYG                  
Subjt:  MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYG------------------

Query:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDRK
            +P L CFTFN FDLT TIEEYQALISL VD  NK YIYDRK
Subjt:  ----NPTLNCFTFNMFDLTHTIEEYQALISLLVDIGNKVYIYDRK

A0A5D3D0S2 Glial fibrillary acidic protein-like8.3e-4658.51Show/hide
Query:  MFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIALCIYKTIIFPRIKG
        MFDLT TIEEY+ALISL +D GNK+YIYDR                    KKQ+K KEGRNCIPINYLINLA  CL  K  LS IALCIY TIIFPRIKG
Subjt:  MFDLTHTIEEYQALISLLVDIGNKVYIYDR--------------------KKQMKTKEGRNCIPINYLINLACACLQGKM-LSFIALCIYKTIIFPRIKG

Query:  YVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNSAH
        YVEE+VVKIF                                 S APMLFIWI++HL YPNNFGY QIKF+SPWNN RNTIRE NSAH
Subjt:  YVEEKVVKIFAEDNS----------------------------SAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNARNTIREVNSAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGACACTCACACATTTGAGATATTTGCCCAAATGATTCCAAATGAAGAATCGTGGGAAGGCGTATCTCAGTGTTCGGAACAATTTCAATTAGAGTCAATGACGGT
TTGGCCAAAGAAATTAGAAGTTCCACTTTTGAAGACTTGTCAGCTGGAATTTGTCAACAATAACCTGGAAGATTTAAAGGGTTTATGGGAAAGCTTAACGTCAAAGCATA
GAATAAAGTTTACAAAAGCATATGGAAACCCTACGTTGAACTGTTTCACATTCAACATGTTTGACTTGACTCATACTATAGAAGAATATCAAGCACTTATTAGCCTACTA
GTTGACATAGGAAATAAGGTTTATATTTATGATCGAAAAAAACAAATGAAGACAAAAGAAGGTAGAAATTGTATTCCCATCAATTATCTCATCAATCTTGCGTGCGCTTG
TCTACAAGGAAAAATGTTGTCTTTTATTGCGTTATGTATCTACAAAACAATTATTTTTCCCAGAATTAAAGGGTATGTAGAAGAAAAGGTGGTTAAGATTTTTGCAGAGG
ATAATTCTTCAGCTGCTCCTATGCTTTTTATTTGGATTGCTAACCATCTAAGTTATCCTAATAATTTTGGATACTATCAGATAAAATTCAATAGTCCATGGAATAATGCA
AGAAACACTATTAGAGAAGTCAATAGTGCACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGACACTCACACATTTGAGATATTTGCCCAAATGATTCCAAATGAAGAATCGTGGGAAGGCGTATCTCAGTGTTCGGAACAATTTCAATTAGAGTCAATGACGGT
TTGGCCAAAGAAATTAGAAGTTCCACTTTTGAAGACTTGTCAGCTGGAATTTGTCAACAATAACCTGGAAGATTTAAAGGGTTTATGGGAAAGCTTAACGTCAAAGCATA
GAATAAAGTTTACAAAAGCATATGGAAACCCTACGTTGAACTGTTTCACATTCAACATGTTTGACTTGACTCATACTATAGAAGAATATCAAGCACTTATTAGCCTACTA
GTTGACATAGGAAATAAGGTTTATATTTATGATCGAAAAAAACAAATGAAGACAAAAGAAGGTAGAAATTGTATTCCCATCAATTATCTCATCAATCTTGCGTGCGCTTG
TCTACAAGGAAAAATGTTGTCTTTTATTGCGTTATGTATCTACAAAACAATTATTTTTCCCAGAATTAAAGGGTATGTAGAAGAAAAGGTGGTTAAGATTTTTGCAGAGG
ATAATTCTTCAGCTGCTCCTATGCTTTTTATTTGGATTGCTAACCATCTAAGTTATCCTAATAATTTTGGATACTATCAGATAAAATTCAATAGTCCATGGAATAATGCA
AGAAACACTATTAGAGAAGTCAATAGTGCACATTAG
Protein sequenceShow/hide protein sequence
MIDTHTFEIFAQMIPNEESWEGVSQCSEQFQLESMTVWPKKLEVPLLKTCQLEFVNNNLEDLKGLWESLTSKHRIKFTKAYGNPTLNCFTFNMFDLTHTIEEYQALISLL
VDIGNKVYIYDRKKQMKTKEGRNCIPINYLINLACACLQGKMLSFIALCIYKTIIFPRIKGYVEEKVVKIFAEDNSSAAPMLFIWIANHLSYPNNFGYYQIKFNSPWNNA
RNTIREVNSAH