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PI0000968 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000968
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:22862778..22863320
RNA-Seq ExpressionPI0000968
SyntenyPI0000968
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.1e-5270.39Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYIT+    +G  RSNN RLRDVADD QQVLDICNNN+R+ME+IH MY + IVPP ++R RV+VE+ ELDEVYHNV+E+ P TQ Q+QTGYGSPM+M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFGVGYCD +V T YYDSGVGPSSSYMD  PSTSYMHG+ H  D GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-5876.32Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR +AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+R RVRVE+ ELDEVYHNV+EVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFG GY DS+VGT YYD+G+ PSS YMD  PS  YMH  GH R  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-5374.34Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AAVG  RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+ IVPPPV+R  VRVE+ ELD+VYHNV+EVP  TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TF  GYCD +VG  YYD+GVGPSSSY+D  PSTSYMH  GH R  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.4e-5876.32Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+R RVRVE+ ELDEVYHNV+EVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFG GY DS+VGT YYD+G+ PSS YMD  PS  YMH  GH R  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-5876.97Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  A VGHLRSNN RLRDV +DPQQVLDICNNNERYME IH +YD+ IVPPPV+RER RVE+ ELDEVYHNV+EVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFG GYCDS+V   YYD+ VGP SSYMD  PSTSYM  YGHGR  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-5270.39Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYIT+    +G  RSNN RLRDVADD QQVLDICNNN+R+ME+IH MY + IVPP ++R RV+VE+ ELDEVYHNV+E+ P TQ Q+QTGYGSPM+M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFGVGYCD +V T YYDSGVGPSSSYMD  PSTSYMHG+ H  D GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.4e-5976.32Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR +AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+R RVRVE+ ELDEVYHNV+EVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFG GY DS+VGT YYD+G+ PSS YMD  PS  YMH  GH R  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.5e-5474.34Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AAVG  RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+ IVPPPV+R  VRVE+ ELD+VYHNV+EVP  TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TF  GYCD +VG  YYD+GVGPSSSY+D  PSTSYMH  GH R  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.1e-5876.32Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RYME+IH MYD+ IVPPPV+R RVRVE+ ELDEVYHNV+EVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFG GY DS+VGT YYD+G+ PSS YMD  PS  YMH  GH R  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein7.4e-5976.97Show/hide
Query:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP
        RLYITR  A VGHLRSNN RLRDV +DPQQVLDICNNNERYME IH +YD+ IVPPPV+RER RVE+ ELDEVYHNV+EVPP TQTQSQTGYGSPM M+P
Subjt:  RLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIP

Query:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL
        TFG GYCDS+V   YYD+ VGP SSYMD  PSTSYM  YGHGR  GEHN  L
Subjt:  TFGVGYCDSKVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACATATTGTACCTCCACCAGTTAACAGGGAACGTGTTCGAGTGGAAAAACCTGAACTCGATGAAG
TTTACCATAACGTAGATGAAGTACCTCCAATGACACAGACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAACATTTGGAGTAGGATATTGTGATTCT
AAGGTTGGTACAAGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCAGGCCATCAACTTCTTACATGCATGGATATGGACACGGACGCGATCGCGG
AGAACATAATGCTGTACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACATATTGTACCTCCACCAGTTAACAGGGAACGTGTTCGAGTGGAAAAACCTGAACTCGATGAAG
TTTACCATAACGTAGATGAAGTACCTCCAATGACACAGACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAACATTTGGAGTAGGATATTGTGATTCT
AAGGTTGGTACAAGATATTATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCAGGCCATCAACTTCTTACATGCATGGATATGGACACGGACGCGATCGCGG
AGAACATAATGCTGTACTATGA
Protein sequenceShow/hide protein sequence
MRLYITRSKAAVGHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVHIVPPPVNRERVRVEKPELDEVYHNVDEVPPMTQTQSQTGYGSPMMMIPTFGVGYCDS
KVGTRYYDSGVGPSSSYMDARPSTSYMHGYGHGRDRGEHNAVL