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PI0000993 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0000993
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr02:17622001..17622504
RNA-Seq ExpressionPI0000993
SyntenyPI0000993
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035429.1 uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa]1.5e-5073.65Show/hide
Query:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYE
        +ND ETVALTQ TND FKNGVPEKMTDP SFT+  S GGMDLG ALCDLGASINLMPLSIFKK+ +G       EGKIEDVLV VDKFLF  DFVILDY+
Subjt:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYE

Query:  ADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        ADR+VPIILGRPFLST   LI VHQGELT+  NDEE+KFNV   +  P
Subjt:  ADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

KAA0067858.1 uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa]7.4e-5371.07Show/hide
Query:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL
        NDCETVALT  T+D+ KNG P+KMTD  SFT+PCSI  MDLG  LCDLGASINLMPLSIFKKLE+ E             SIAK EGKIED+LV VDKFL
Subjt:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL

Query:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        F ADF+ILDYEA++EVPII GRPFLSTG  LIDVHQGELT+R ND EVKFNV NA+  P
Subjt:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]7.4e-5371.07Show/hide
Query:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL
        NDCETVALT  T+D+ KNG P+KMTD  SFT+PCSI  MDLG  LCDLGASINLMPLSIFKKLE+ E             SIAK EGKIED+LV VDKFL
Subjt:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL

Query:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        F ADF+ILDYEA++EVPII GRPFLSTG  LIDVHQGELT+R ND EVKFNV NA+  P
Subjt:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]6.3e-5266.25Show/hide
Query:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF
        + + ETVALT+  + + K+ +P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SIFKKL +GEA            S+A PEGKIEDVLV VDKF
Subjt:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF

Query:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        +FPADF+ILDYEADR+VPIILGRPFL+TGR LIDV  GELT+R+ND++V FNV NA+  P
Subjt:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

XP_030478287.1 uncharacterized protein LOC115695357 [Cannabis sativa]6.3e-5266.25Show/hide
Query:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF
        + + ETVALT+  + + K+ +P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SIFKKL +GEA            S+A PEGKIEDVLV VDKF
Subjt:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF

Query:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        +FPADF+ILDYEADR+VPIILGRPFL+TGR LIDV  GELT+R+ND++V FNV NA+  P
Subjt:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

TrEMBL top hitse value%identityAlignment
A0A1S3CN55 uncharacterized protein LOC1035028053.6e-5371.07Show/hide
Query:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL
        NDCETVALT  T+D+ KNG P+KMTD  SFT+PCSI  MDLG  LCDLGASINLMPLSIFKKLE+ E             SIAK EGKIED+LV VDKFL
Subjt:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL

Query:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        F ADF+ILDYEA++EVPII GRPFLSTG  LIDVHQGELT+R ND EVKFNV NA+  P
Subjt:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

A0A5A7VJ95 Uncharacterized protein3.6e-5371.07Show/hide
Query:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL
        NDCETVALT  T+D+ KNG P+KMTD  SFT+PCSI  MDLG  LCDLGASINLMPLSIFKKLE+ E             SIAK EGKIED+LV VDKFL
Subjt:  NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKFL

Query:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        F ADF+ILDYEA++EVPII GRPFLSTG  LIDVHQGELT+R ND EVKFNV NA+  P
Subjt:  FPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

A0A5D3DPZ2 Uncharacterized protein7.5e-5173.65Show/hide
Query:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYE
        +ND ETVALTQ TND FKNGVPEKMTDP SFT+  S GGMDLG ALCDLGASINLMPLSIFKK+ +G       EGKIEDVLV VDKFLF  DFVILDY+
Subjt:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYE

Query:  ADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        ADR+VPIILGRPFLST   LI VHQGELT+  NDEE+KFNV   +  P
Subjt:  ADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

A0A6J1CPJ3 uncharacterized protein LOC1110129474.1e-4963.12Show/hide
Query:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF
        + + ETVALT+ +++VFK+  P K+ DPGSFT+ C IGG D+GRALCDLGA INLMPLSIFKKLE+G+A            SI KPEGKIEDVLV VDKF
Subjt:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF

Query:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP
        +FPADF+ILD EAD++VPIILGRPFL+TG  LIDV +GELT+R++D++V FN+ +A+  P
Subjt:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP

A0A6J1DY39 uncharacterized protein LOC1110256532.4e-4963.69Show/hide
Query:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF
        + + ETVALT+ +++VFK+ +P K+ DPGSFT+PC IGG D+GRALCDLGASINLMPLSIFKK E+G+A            SI KPEGKIEDVLV VDKF
Subjt:  MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEA------------SIAKPEGKIEDVLVMVDKF

Query:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAV
        +FP DF+ILD EAD++VPIILGRPFL+TG  LIDV +GELT+R++D++V FN+ +A+
Subjt:  LFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACTGCGAAACAGTGGCTCTGACGCAGGTAACGAACGACGTCTTCAAGAATGGGGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGATGCCATGCTCAAT
AGGCGGCATGGATCTAGGTCGCGCACTATGTGATCTGGGAGCCAGTATCAACCTGATGCCCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCATCCATCGCCAAGC
CTGAGGGGAAAATTGAAGACGTTTTGGTTATGGTGGATAAATTCTTGTTCCCCGCCGACTTTGTCATTCTGGATTACGAAGCGGATCGGGAGGTGCCAATTATCTTGGGG
CGACCATTCTTGTCTACTGGTCGCGTCCTAATAGATGTCCACCAAGGGGAATTAACTCTGCGTTTGAATGATGAAGAGGTCAAGTTCAACGTCGCAAATGCAGTGAATTC
CCCTTTGACGAAAGCTGCAGCACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGACTGCGAAACAGTGGCTCTGACGCAGGTAACGAACGACGTCTTCAAGAATGGGGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGATGCCATGCTCAAT
AGGCGGCATGGATCTAGGTCGCGCACTATGTGATCTGGGAGCCAGTATCAACCTGATGCCCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCATCCATCGCCAAGC
CTGAGGGGAAAATTGAAGACGTTTTGGTTATGGTGGATAAATTCTTGTTCCCCGCCGACTTTGTCATTCTGGATTACGAAGCGGATCGGGAGGTGCCAATTATCTTGGGG
CGACCATTCTTGTCTACTGGTCGCGTCCTAATAGATGTCCACCAAGGGGAATTAACTCTGCGTTTGAATGATGAAGAGGTCAAGTTCAACGTCGCAAATGCAGTGAATTC
CCCTTTGACGAAAGCTGCAGCACAATAG
Protein sequenceShow/hide protein sequence
MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIILG
RPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSPLTKAAAQ