; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001011 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001011
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr12:19770228..19772104
RNA-Seq ExpressionPI0001011
SyntenyPI0001011
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032594.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]3.9e-16989.63Show/hide
Query:  NRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMV
        NRIASI VGNSQIWPLYAIKC SHQSSSTNISPDEVKVGDEVLNQIIAPRENAS+C  EIVDACID+IC LGHLAAAAQLLKSLCNE++S NS KAYDMV
Subjt:  NRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMV

Query:  LLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYT
        LLAASERGDTPL CQ FKVA+VSCKSLSSASYMSFARAFTKTNDSSKLLE VKEI+E+TSQ C+VINRIIFA S+CRE DKAFQIFNQMKCLSCTPDLYT
Subjt:  LLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYT

Query:  YNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIR
        YNI+LDMLGRAGRV+EILH+FVSMKD+GIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGI+PDLLTYTALIESFGR+GNIEEAL LLKEMKLK I 
Subjt:  YNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIR

Query:  PSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR
        PSSYIY+SLI  S KMGKVELATNLLNEMKLSESKLARPEDFKRR R
Subjt:  PSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR

XP_008462480.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11900 isoform X1 [Cucumis melo]6.0e-17889.59Show/hide
Query:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK
        MSLYQL IYRNLLHYS ANRIASI VGNSQIWPLYAIKC SHQSSSTNISPDEVKVGDEVLNQIIAPRENAS+C  EIVDACID+IC LGHLAAAAQLLK
Subjt:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK

Query:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA
        SLCNE++S NS KAYDMVLLAASERGDTPL CQ FKVA+VSCKSLSSASYMSFARAFTKTNDSSKLLE VKEI+E+TSQ C+VINRIIFA S+CRE DKA
Subjt:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA

Query:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG
        FQIFNQMKCLSCTPDLYTYNI+LDMLGRAGRV+EILH+FVSMKD+GIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGI+PDLLTYTALIESFGR+G
Subjt:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG

Query:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR
        NIEEAL LLKEMKLK I PSSYIY+SLI  S KMGKVELATNLLNEMKLSESKLARPEDFKRR R
Subjt:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR

XP_011654081.1 pentatricopeptide repeat-containing protein At1g11900 isoform X1 [Cucumis sativus]9.0e-16686.23Show/hide
Query:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK
        MSLY LAI+RN LHYS ANRIAS  VGNSQIWPLYAIKCLSHQSS T I P+EVKVGDE LNQIIAP ENAS C  EI+DACID+ICRLGHLAAAA LLK
Subjt:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK

Query:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA
        SLCNE+V ++S +AYDMVLLAASERGDTPL C+ FKVAL+SCKSLSSASYMSFARAFTKTND SKLLE VKEIIEITSQKC VINRIIFA SE RE DKA
Subjt:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA

Query:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG
        FQIFNQMKCLSCTPDLYTYNIILDM+GRAGRVDEILHIFVSMK++GIAPDIVSYNTLINSLRKVGRLDIS+IYFREMVAMGIEPDLLTYTALIES+GR+G
Subjt:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG

Query:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR
        N+EEAL LLKEMKL NIRPSSYIYRSLI  SM M KVELAT+LLNEMKLS+S+LARPEDFKRR
Subjt:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR

XP_011654087.1 pentatricopeptide repeat-containing protein At1g11900 isoform X2 [Cucumis sativus]5.3e-15886.67Show/hide
Query:  NRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMV
        NRIAS  VGNSQIWPLYAIKCLSHQSS T I P+EVKVGDE LNQIIAP ENAS C  EI+DACID+ICRLGHLAAAA LLKSLCNE+V ++S +AYDMV
Subjt:  NRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMV

Query:  LLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYT
        LLAASERGDTPL C+ FKVAL+SCKSLSSASYMSFARAFTKTND SKLLE VKEIIEITSQKC VINRIIFA SE RE DKAFQIFNQMKCLSCTPDLYT
Subjt:  LLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYT

Query:  YNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIR
        YNIILDM+GRAGRVDEILHIFVSMK++GIAPDIVSYNTLINSLRKVGRLDIS+IYFREMVAMGIEPDLLTYTALIES+GR+GN+EEAL LLKEMKL NIR
Subjt:  YNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIR

Query:  PSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR
        PSSYIYRSLI  SM M KVELAT+LLNEMKLS+S+LARPEDFKRR
Subjt:  PSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR

XP_038893594.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g11900 [Benincasa hispida]2.1e-15479.61Show/hide
Query:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK
        MS+Y+L ++RNLLH S AN IAS+ VGNSQ WPLYAI+ LSHQSSSTNI PDEVKVGDEVLNQIIAPRENAS C  E  DACID++CR+GHLAAAAQLLK
Subjt:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK

Query:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA
        SLC+ ++  +S KAYDMVLLAASE GDT L  Q FK +LVSCKSLSS SY SFA AFT+TNDS+KLLEYVKEIIE+T   C VINRIIFA S+CRE DKA
Subjt:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA

Query:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG
         QIFNQMK LSC PDLYTYNIILDMLGRAGRVDEILH+FVSMK+DGIAPDIVSYNTLINS RKVGRLD+ L+YF+EMVA+ IEPDLLTYTALIESFGR G
Subjt:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG

Query:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR
        NIEEA  LL+EMKLKNI PSSYIY+SLIG SMKMGKVELA NLL EMKLS+SKLA P+DFKRR
Subjt:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR

TrEMBL top hitse value%identityAlignment
A0A0A0LXZ6 Uncharacterized protein4.3e-16686.23Show/hide
Query:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK
        MSLY LAI+RN LHYS ANRIAS  VGNSQIWPLYAIKCLSHQSS T I P+EVKVGDE LNQIIAP ENAS C  EI+DACID+ICRLGHLAAAA LLK
Subjt:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK

Query:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA
        SLCNE+V ++S +AYDMVLLAASERGDTPL C+ FKVAL+SCKSLSSASYMSFARAFTKTND SKLLE VKEIIEITSQKC VINRIIFA SE RE DKA
Subjt:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA

Query:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG
        FQIFNQMKCLSCTPDLYTYNIILDM+GRAGRVDEILHIFVSMK++GIAPDIVSYNTLINSLRKVGRLDIS+IYFREMVAMGIEPDLLTYTALIES+GR+G
Subjt:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG

Query:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR
        N+EEAL LLKEMKL NIRPSSYIYRSLI  SM M KVELAT+LLNEMKLS+S+LARPEDFKRR
Subjt:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR

A0A1S3CIJ8 pentatricopeptide repeat-containing protein At1g11900 isoform X12.9e-17889.59Show/hide
Query:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK
        MSLYQL IYRNLLHYS ANRIASI VGNSQIWPLYAIKC SHQSSSTNISPDEVKVGDEVLNQIIAPRENAS+C  EIVDACID+IC LGHLAAAAQLLK
Subjt:  MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLK

Query:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA
        SLCNE++S NS KAYDMVLLAASERGDTPL CQ FKVA+VSCKSLSSASYMSFARAFTKTNDSSKLLE VKEI+E+TSQ C+VINRIIFA S+CRE DKA
Subjt:  SLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKA

Query:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG
        FQIFNQMKCLSCTPDLYTYNI+LDMLGRAGRV+EILH+FVSMKD+GIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGI+PDLLTYTALIESFGR+G
Subjt:  FQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYG

Query:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR
        NIEEAL LLKEMKLK I PSSYIY+SLI  S KMGKVELATNLLNEMKLSESKLARPEDFKRR R
Subjt:  NIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR

A0A5D3DB98 Pentatricopeptide repeat-containing protein1.9e-16989.63Show/hide
Query:  NRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMV
        NRIASI VGNSQIWPLYAIKC SHQSSSTNISPDEVKVGDEVLNQIIAPRENAS+C  EIVDACID+IC LGHLAAAAQLLKSLCNE++S NS KAYDMV
Subjt:  NRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMV

Query:  LLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYT
        LLAASERGDTPL CQ FKVA+VSCKSLSSASYMSFARAFTKTNDSSKLLE VKEI+E+TSQ C+VINRIIFA S+CRE DKAFQIFNQMKCLSCTPDLYT
Subjt:  LLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYT

Query:  YNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIR
        YNI+LDMLGRAGRV+EILH+FVSMKD+GIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGI+PDLLTYTALIESFGR+GNIEEAL LLKEMKLK I 
Subjt:  YNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIR

Query:  PSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR
        PSSYIY+SLI  S KMGKVELATNLLNEMKLSESKLARPEDFKRR R
Subjt:  PSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR

A0A6J1HKH0 pentatricopeptide repeat-containing protein At1g11900-like7.7e-13974.44Show/hide
Query:  YQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLC
        ++L   RN+LHYS  N I S+ VGN Q W LYAI+   HQ S+TNISPDE KV DEVLNQI A RENAS C  E  D CID++CR  +L AAAQLLKS C
Subjt:  YQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLC

Query:  NEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQI
        + ++S +S KAYDMVLLAASERGDT L CQ FK +LVS K LSS SYM+FA+AF +T+DSSKLLEYVKEIIE+T     VINRIIFA SECRE DKA QI
Subjt:  NEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQI

Query:  FNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIE
        FNQMK LS  PDLYTYNIILD LGRAGR+DEILH+FVSMK+DGIAPDIVSYNTLINSLRKVGRLD+ LIYFREMVAM IEPDLLTYTALIESFGR GN+E
Subjt:  FNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIE

Query:  EALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR
        EAL LL+EMKLK+IRPSSYIY+SLI  SMK+GKVELA NLL EMKLS SKLA P+DFKR+
Subjt:  EALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR

A0A6J1HYS7 pentatricopeptide repeat-containing protein At1g119001.8e-14075.28Show/hide
Query:  YQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLC
        + L   RN+LHYS  N I SI VGN Q W LYAI+   HQSS+ NISPDE KV DEVLNQI A RENAS C  E  D CID++CR G+L AAAQLLKSLC
Subjt:  YQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLC

Query:  NEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQI
        + ++S +S KAYDMVLLAASERGDT L CQ FK +LVS K LSS SYM+FA+AF +T+DSSKLLEYVKEIIE+T     VINRIIFA SECRE DKA QI
Subjt:  NEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQI

Query:  FNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIE
        FNQMK LS  PDLYTYNIILD LGRAGR+DEILH+FVSMK+DGIAPDIVSYNTLINSLRKVGRLD+ LIYFREMVAM IEPDLLTYTALIESFGR GN+E
Subjt:  FNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIE

Query:  EALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR
        EAL LL+EMKLK+IRPSSYIY+SLI  SMK+GKVELA NLL EMKLS SKLA P+DFKR+
Subjt:  EALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSESKLARPEDFKRR

SwissProt top hitse value%identityAlignment
O80958 Pentatricopeptide repeat-containing protein At2g39230, mitochondrial2.0e-2223.45Show/hide
Query:  EVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFT
        +V+NQ+ A    A+     I +  I+ +C++G  + A ++L++L  E+    S  +Y+ ++    + GDT    + ++    + KS +  ++ S    F 
Subjt:  EVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFT

Query:  KTNDSSKLLEYVKEIIEITSQ-KCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTL
        K+N     LE   E+  +  +        +I    +  +   A+ +F+++  L   P++  YN ++      G++D  + ++  M +DGI+ D+ +Y T+
Subjt:  KTNDSSKLLEYVKEIIEITSQ-KCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTL

Query:  INSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM
        I+ L K G ++++   + E++ +GI PD + +  L+    + G   +A ++L+EMK K++ P+  +Y ++I    + G +  A  L +EM
Subjt:  INSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM

P0C894 Putative pentatricopeptide repeat-containing protein At2g021501.2e-2433.16Show/hide
Query:  FTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYD--KAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSY
        F K   +  +  + K++I     + TV    I     C+E D   A  +F +MK     PD  TYN ++D  G+ GR+D+ +  F  MKD    PD+++Y
Subjt:  FTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYD--KAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSY

Query:  NTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM
        N LIN   K G+L I L ++REM   G++P++++Y+ L+++F + G +++A++   +M+   + P+ Y Y SLI  + K+G +  A  L NEM
Subjt:  NTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM

Q5BIV3 Pentatricopeptide repeat-containing protein At1g119007.1e-5742.36Show/hide
Query:  DEVLNQIIAPRENASSCRREI-VDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALV--SCKSLSSASYMSFA
        +E+L +I+   E+ S    +I     +++  R G+L+ A  LL+SL  + +       +  +L AA E  D  L C+ F+  L+    + LSS  Y++ A
Subjt:  DEVLNQIIAPRENASSCRREI-VDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALV--SCKSLSSASYMSFA

Query:  RAFTKTNDSSKLLEYVKEIIEIT-SQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDD-GIAPDIV
        RAF  T+D + L   +KEI E +   +  V+NRIIFA +E R+ DK   I  +MK   C PD+ TYN +LD+LGRAG V+EIL +  +MK+D  ++ +I+
Subjt:  RAFTKTNDSSKLLEYVKEIIEIT-SQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDD-GIAPDIV

Query:  SYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSES
        +YNT++N +RK  R D+ L+ + EMV  GIEPDLL+YTA+I+S GR GN++E+LRL  EMK + IRPS Y+YR+LI C  K G  + A  L +E+K + S
Subjt:  SYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSES

Query:  -KLARPEDFKRRNR
          LA P+DFKR  R
Subjt:  -KLARPEDFKRRNR

Q9SIC9 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic6.7e-2335.98Show/hide
Query:  NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEP
        N ++ A+ +  + D AF+I  QM      P++ +Y+ ++D   +AGR DE L++F  M+  GIA D VSYNTL++   KVGR + +L   REM ++GI+ 
Subjt:  NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEP

Query:  DLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMK
        D++TY AL+  +G+ G  +E  ++  EMK +++ P+   Y +LI    K G  + A  +  E K
Subjt:  DLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMK

Q9ZU27 Pentatricopeptide repeat-containing protein At1g51965, mitochondrial1.5e-2734.33Show/hide
Query:  SYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVI-NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGI
        SYMS   +      + + +E + +I E      T++ N +  AL + ++      +F +MK    +PD++TYNI++   GR G VDE ++IF  ++    
Subjt:  SYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVI-NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGI

Query:  APDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM
         PDI+SYN+LIN L K G +D + + F+EM   G+ PD++TY+ L+E FG+   +E A  L +EM +K  +P+   Y  L+ C  K G+   A +L ++M
Subjt:  APDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM

Query:  K
        K
Subjt:  K

Arabidopsis top hitse value%identityAlignment
AT1G11900.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.1e-5842.36Show/hide
Query:  DEVLNQIIAPRENASSCRREI-VDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALV--SCKSLSSASYMSFA
        +E+L +I+   E+ S    +I     +++  R G+L+ A  LL+SL  + +       +  +L AA E  D  L C+ F+  L+    + LSS  Y++ A
Subjt:  DEVLNQIIAPRENASSCRREI-VDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALV--SCKSLSSASYMSFA

Query:  RAFTKTNDSSKLLEYVKEIIEIT-SQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDD-GIAPDIV
        RAF  T+D + L   +KEI E +   +  V+NRIIFA +E R+ DK   I  +MK   C PD+ TYN +LD+LGRAG V+EIL +  +MK+D  ++ +I+
Subjt:  RAFTKTNDSSKLLEYVKEIIEIT-SQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDD-GIAPDIV

Query:  SYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSES
        +YNT++N +RK  R D+ L+ + EMV  GIEPDLL+YTA+I+S GR GN++E+LRL  EMK + IRPS Y+YR+LI C  K G  + A  L +E+K + S
Subjt:  SYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMKLSES

Query:  -KLARPEDFKRRNR
          LA P+DFKR  R
Subjt:  -KLARPEDFKRRNR

AT1G51965.1 ABA Overly-Sensitive 51.1e-2834.33Show/hide
Query:  SYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVI-NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGI
        SYMS   +      + + +E + +I E      T++ N +  AL + ++      +F +MK    +PD++TYNI++   GR G VDE ++IF  ++    
Subjt:  SYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVI-NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGI

Query:  APDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM
         PDI+SYN+LIN L K G +D + + F+EM   G+ PD++TY+ L+E FG+   +E A  L +EM +K  +P+   Y  L+ C  K G+   A +L ++M
Subjt:  APDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM

Query:  K
        K
Subjt:  K

AT2G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.7e-2633.16Show/hide
Query:  FTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYD--KAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSY
        F K   +  +  + K++I     + TV    I     C+E D   A  +F +MK     PD  TYN ++D  G+ GR+D+ +  F  MKD    PD+++Y
Subjt:  FTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYD--KAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSY

Query:  NTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM
        N LIN   K G+L I L ++REM   G++P++++Y+ L+++F + G +++A++   +M+   + P+ Y Y SLI  + K+G +  A  L NEM
Subjt:  NTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM

AT2G31400.1 genomes uncoupled 14.8e-2435.98Show/hide
Query:  NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEP
        N ++ A+ +  + D AF+I  QM      P++ +Y+ ++D   +AGR DE L++F  M+  GIA D VSYNTL++   KVGR + +L   REM ++GI+ 
Subjt:  NRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEP

Query:  DLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMK
        D++TY AL+  +G+ G  +E  ++  EMK +++ P+   Y +LI    K G  + A  +  E K
Subjt:  DLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEMK

AT2G39230.1 LATERAL ORGAN JUNCTION1.4e-2323.45Show/hide
Query:  EVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFT
        +V+NQ+ A    A+     I +  I+ +C++G  + A ++L++L  E+    S  +Y+ ++    + GDT    + ++    + KS +  ++ S    F 
Subjt:  EVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRNSFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFT

Query:  KTNDSSKLLEYVKEIIEITSQ-KCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTL
        K+N     LE   E+  +  +        +I    +  +   A+ +F+++  L   P++  YN ++      G++D  + ++  M +DGI+ D+ +Y T+
Subjt:  KTNDSSKLLEYVKEIIEITSQ-KCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYNIILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTL

Query:  INSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM
        I+ L K G ++++   + E++ +GI PD + +  L+    + G   +A ++L+EMK K++ P+  +Y ++I    + G +  A  L +EM
Subjt:  INSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGCSMKMGKVELATNLLNEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTTTACCAACTTGCTATCTATAGGAATCTTCTGCATTACTCGTGTGCTAATAGAATTGCATCTATCCTAGTTGGTAACTCTCAAATCTGGCCGCTTTATGCCAT
CAAATGCCTTAGCCATCAGTCATCTAGTACAAATATCTCTCCTGATGAAGTGAAAGTGGGGGATGAAGTCTTGAATCAGATTATTGCTCCGAGGGAAAATGCCTCAAGTT
GTAGACGTGAGATCGTTGATGCTTGCATTGATGAGATTTGTCGACTGGGACATCTTGCAGCTGCAGCTCAATTACTTAAATCATTGTGCAATGAGGAAGTATCTCGTAAC
TCCTTCAAGGCATATGATATGGTTTTGCTTGCAGCAAGTGAAAGGGGAGACACTCCCCTTTTCTGTCAAGCTTTTAAAGTTGCCCTAGTTTCATGTAAATCATTGAGTTC
GGCTTCTTACATGAGTTTTGCCAGGGCCTTTACCAAGACAAATGATAGTAGCAAGCTACTGGAATATGTCAAAGAAATAATCGAGATTACCTCTCAAAAATGCACAGTTA
TAAACAGAATTATCTTTGCCTTGTCCGAGTGTAGGGAGTATGATAAAGCCTTTCAGATATTTAATCAGATGAAGTGTCTGTCATGTACACCAGATTTGTATACATACAAC
ATCATTTTGGATATGCTAGGTCGTGCAGGCCGCGTGGATGAAATTCTTCATATATTTGTTTCCATGAAAGATGATGGCATTGCCCCAGATATTGTGTCTTATAATACATT
GATAAATAGCTTAAGGAAGGTGGGTAGACTAGATATATCCTTGATTTACTTCAGGGAAATGGTTGCAATGGGAATTGAACCTGATTTGCTTACTTATACAGCTTTGATAG
AGAGTTTTGGTCGATATGGAAACATCGAGGAAGCTTTGAGACTCCTCAAAGAGATGAAGCTTAAGAATATCCGTCCTTCAAGCTATATATACAGGTCCCTTATTGGATGT
TCAATGAAGATGGGGAAGGTGGAATTGGCTACGAACCTTCTCAATGAAATGAAATTAAGTGAATCAAAACTTGCTCGCCCAGAGGATTTCAAACGAAGAAATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTTTACCAACTTGCTATCTATAGGAATCTTCTGCATTACTCGTGTGCTAATAGAATTGCATCTATCCTAGTTGGTAACTCTCAAATCTGGCCGCTTTATGCCAT
CAAATGCCTTAGCCATCAGTCATCTAGTACAAATATCTCTCCTGATGAAGTGAAAGTGGGGGATGAAGTCTTGAATCAGATTATTGCTCCGAGGGAAAATGCCTCAAGTT
GTAGACGTGAGATCGTTGATGCTTGCATTGATGAGATTTGTCGACTGGGACATCTTGCAGCTGCAGCTCAATTACTTAAATCATTGTGCAATGAGGAAGTATCTCGTAAC
TCCTTCAAGGCATATGATATGGTTTTGCTTGCAGCAAGTGAAAGGGGAGACACTCCCCTTTTCTGTCAAGCTTTTAAAGTTGCCCTAGTTTCATGTAAATCATTGAGTTC
GGCTTCTTACATGAGTTTTGCCAGGGCCTTTACCAAGACAAATGATAGTAGCAAGCTACTGGAATATGTCAAAGAAATAATCGAGATTACCTCTCAAAAATGCACAGTTA
TAAACAGAATTATCTTTGCCTTGTCCGAGTGTAGGGAGTATGATAAAGCCTTTCAGATATTTAATCAGATGAAGTGTCTGTCATGTACACCAGATTTGTATACATACAAC
ATCATTTTGGATATGCTAGGTCGTGCAGGCCGCGTGGATGAAATTCTTCATATATTTGTTTCCATGAAAGATGATGGCATTGCCCCAGATATTGTGTCTTATAATACATT
GATAAATAGCTTAAGGAAGGTGGGTAGACTAGATATATCCTTGATTTACTTCAGGGAAATGGTTGCAATGGGAATTGAACCTGATTTGCTTACTTATACAGCTTTGATAG
AGAGTTTTGGTCGATATGGAAACATCGAGGAAGCTTTGAGACTCCTCAAAGAGATGAAGCTTAAGAATATCCGTCCTTCAAGCTATATATACAGGTCCCTTATTGGATGT
TCAATGAAGATGGGGAAGGTGGAATTGGCTACGAACCTTCTCAATGAAATGAAATTAAGTGAATCAAAACTTGCTCGCCCAGAGGATTTCAAACGAAGAAATAGATAA
Protein sequenceShow/hide protein sequence
MSLYQLAIYRNLLHYSCANRIASILVGNSQIWPLYAIKCLSHQSSSTNISPDEVKVGDEVLNQIIAPRENASSCRREIVDACIDEICRLGHLAAAAQLLKSLCNEEVSRN
SFKAYDMVLLAASERGDTPLFCQAFKVALVSCKSLSSASYMSFARAFTKTNDSSKLLEYVKEIIEITSQKCTVINRIIFALSECREYDKAFQIFNQMKCLSCTPDLYTYN
IILDMLGRAGRVDEILHIFVSMKDDGIAPDIVSYNTLINSLRKVGRLDISLIYFREMVAMGIEPDLLTYTALIESFGRYGNIEEALRLLKEMKLKNIRPSSYIYRSLIGC
SMKMGKVELATNLLNEMKLSESKLARPEDFKRRNR