; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001029 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001029
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr01:15968358..15969279
RNA-Seq ExpressionPI0001029
SyntenyPI0001029
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]5.4e-7456.85Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MESIYP IR YL  VGFE+WS A SR+RRY +MTTN  ES+NS LK DR+L VA LL+ IREFLQ+WF++RRKA+  +K++L+SWAE ++RK  +ESRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
        +V+P++ VE+ V+ G K F+VKLN  SCSC  WD  EI C+HAL V+R  N+  Y++VS YY++ +L +TY G VRS+G H++W +V  +   LPPIF+R
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI
        P GRP+K RIPSIGEV+ S  +CS C   GHN RTC    I
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]2.8e-7556.85Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MESIYP IR YL  VGFE+WSRA SR+RRY +MTTN  ES+NS LK DR+L VA LL+ IREFLQ+WF++RRKA+  +K++L+SWAE ++RK  +ESRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
        +V+P++ VE+ V+ G K F+VKLN  SCSC  WD  EIPC+HAL V+R  N+  Y++VS YY++ +L +TY G VR +G H++W +V  +   LPP+F+R
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI
        PAGRP+K RIPSIGEV+ S  +CS C    HN RTC+   I
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI

XP_011654398.1 uncharacterized protein LOC105435382 [Cucumis sativus]1.4e-11986.42Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MESIY DIRSYLSNVGFE+WSRA SRRRRY+MMTTNPSESVNS+LKEDRNL+VA LLDGIREFLQKWFHDRR+ASLSMKTILTSWAE+ILRKQHEESRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
         VHPINN+EYNVMVGDKQ IVKLNLGSCSCRVWDFHEIPCSHAL VL M N+ +YSYVS+YYHSQ LLSTYLG V  +GVHSNWR+VNDD+ ALPPIFKR
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQINQ
          GRPK LR+PSIGEVNSS  RCSSCHGKGHNSRTCKLRQINQ
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQINQ

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]1.2e-9771.6Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        +ESI P+IRSYL NVG +KWSRA S+RRRY+MMTTNPSE VN +LKE+RNL VA LLD IR  LQKWFHDRRKASLSM TILT WAENIL  QHE+SRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
        ++HPI  VEY+VM GDKQF+VKLN  SCS +VWDF EIPCSH L VLR+ N++ YSY+SNYY+S  L  TY+GCVR VGVHSNWR+++D +RALPPIFK 
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQINQ
         A RPKK RIPS+GE  SS +RCS CH KGHNSRTCKL  I+Q
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQINQ

XP_038904248.1 uncharacterized protein LOC120090597 [Benincasa hispida]3.0e-9373.13Show/hide
Query:  FEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSFLVHPINNVEYNVMVGD
        FEKWSR  S+R RY+MMTTNPSE VNS+LKE+RNL VA LLD IR  L+ WFHDRRKAS SM TILT WAENIL  QHE+SRSF+VHPI+NV+Y+VM GD
Subjt:  FEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSFLVHPINNVEYNVMVGD

Query:  KQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKRPAGRPKKLRIPSIGEV
        KQF+VKLNLGSCSCRVWDF EI CSHAL +L + N++ YSYVSNYY+S  L  TYLGCVR +GVHSNWR+++DD+RALPPIFKR AG PKK RIPS  E 
Subjt:  KQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKRPAGRPKKLRIPSIGEV

Query:  NSSPIRCSSCHGKGHNSRTCKLRQINQ
         SS +RCS CH KGHNSRTCKLR I+Q
Subjt:  NSSPIRCSSCHGKGHNSRTCKLRQINQ

TrEMBL top hitse value%identityAlignment
A0A1S4DWH2 uncharacterized protein LOC1079908621.9e-7255.6Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MESIYP IR YL  VGFE+WSRA SR+RRY +MTTN  ES+NS LK DR+L VA LL+ IREFLQ+WF++RRKA+  +K++L+SW+E ++RK  +ESRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
        +V+P++ VE+ V+ G K F+VKLN  SCSC  WD  EIP +HAL V+   N+  Y++VS YY++ +L +TY G VR +G H++W +V  +   LPP+F+R
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI
        PA RP+K RIPSIGEV+ S  +CS C   GHN RTC    I
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like2.7e-6354.85Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MES+YP IR YLS V FEKW+RA   R+RY MMTTN SES+N++LKE R+L VA LLD IR+ LQ WF+DRRK +  M+T+LTSWAE  LR QH+ SRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
         V+ IN+VE+ V+ G KQFIV+L+  SC+CRVWD  EIPC+HALAVLR                          +R VG H+NW+ +  +   LPP FKR
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCK
         AGRP+K RI SIGE      RCS CH  GHN R CK
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCK

A0A5A7V6N4 SWIM-type domain-containing protein2.6e-7456.85Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MESIYP IR YL  VGFE+WS A SR+RRY +MTTN  ES+NS LK DR+L VA LL+ IREFLQ+WF++RRKA+  +K++L+SWAE ++RK  +ESRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
        +V+P++ VE+ V+ G K F+VKLN  SCSC  WD  EI C+HAL V+R  N+  Y++VS YY++ +L +TY G VRS+G H++W +V  +   LPPIF+R
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI
        P GRP+K RIPSIGEV+ S  +CS C   GHN RTC    I
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI

A0A5D3BD68 SWIM-type domain-containing protein1.4e-7556.85Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MESIYP IR YL  VGFE+WSRA SR+RRY +MTTN  ES+NS LK DR+L VA LL+ IREFLQ+WF++RRKA+  +K++L+SWAE ++RK  +ESRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
        +V+P++ VE+ V+ G K F+VKLN  SCSC  WD  EIPC+HAL V+R  N+  Y++VS YY++ +L +TY G VR +G H++W +V  +   LPP+F+R
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI
        PAGRP+K RIPSIGEV+ S  +CS C    HN RTC+   I
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCKLRQI

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like5.4e-6455.27Show/hide
Query:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF
        MES+YP IR YLS V FEKW+RA   R+RY MMTTN SES+N++LKE R+L VA LLD IR+ LQ WF+DRRK +  M+T+LTSWAE  LR QH+ SRSF
Subjt:  MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSF

Query:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR
         V+ IN+VE+ V+ G KQFIV+L+  SC+CRVWD  EIPC+HALAVLR                          +R VG H+NW+ +  +   LPP FKR
Subjt:  LVHPINNVEYNVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKR

Query:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCK
         AGRP+K RI SIGE   S  RCS CH  GHN R CK
Subjt:  PAGRPKKLRIPSIGEVNSSPIRCSSCHGKGHNSRTCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase8.7e-0621.93Show/hide
Query:  PDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVAR------LLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRS
        P+   +L  +   KW+ A+    RY ++  +  E++ ++ +      VA       + D +R    K       +SL+   + T    + L +   +S  
Subjt:  PDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVAR------LLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRS

Query:  FLVHPINNVEYNVMVGD--KQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNW
        +++  +    + V      +++IV+LN+ +C+CR +  ++ PC HALAV     I    YV   Y  +    TY      V   + W
Subjt:  FLVHPINNVEYNVMVGD--KQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTATTTATCCAGATATACGAAGTTATCTTAGTAATGTTGGATTTGAGAAGTGGTCTCGAGCAAATTCACGAAGAAGAAGGTACGATATGATGACGACAAATCC
CTCAGAAAGTGTTAACTCGATTTTGAAAGAGGATAGAAACTTGCTTGTTGCAAGATTACTTGATGGAATTAGAGAGTTCTTGCAAAAGTGGTTTCATGATCGAAGAAAAG
CTAGTTTGTCAATGAAAACAATTTTAACCTCTTGGGCTGAAAATATACTACGTAAGCAACATGAAGAATCAAGAAGTTTCTTGGTTCATCCAATCAACAATGTCGAATAC
AATGTAATGGTCGGTGATAAACAATTCATAGTGAAGTTGAACTTGGGATCTTGTAGCTGTCGAGTATGGGATTTCCATGAGATTCCTTGTTCTCATGCTCTTGCTGTTCT
TCGAATGTTTAACATAGAAACTTATTCTTATGTGTCTAATTATTATCATTCACAGATATTGTTGTCAACATATTTGGGTTGTGTGCGATCAGTTGGAGTTCATTCAAATT
GGAGGATTGTAAATGACGACGTTCGAGCTTTACCTCCTATTTTTAAACGTCCAGCTGGGAGACCTAAAAAATTAAGAATCCCATCAATTGGTGAAGTTAATAGTAGTCCA
ATAAGATGTAGTAGTTGTCATGGCAAGGGTCATAATTCTAGGACTTGCAAACTTCGTCAAATTAATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTATTTATCCAGATATACGAAGTTATCTTAGTAATGTTGGATTTGAGAAGTGGTCTCGAGCAAATTCACGAAGAAGAAGGTACGATATGATGACGACAAATCC
CTCAGAAAGTGTTAACTCGATTTTGAAAGAGGATAGAAACTTGCTTGTTGCAAGATTACTTGATGGAATTAGAGAGTTCTTGCAAAAGTGGTTTCATGATCGAAGAAAAG
CTAGTTTGTCAATGAAAACAATTTTAACCTCTTGGGCTGAAAATATACTACGTAAGCAACATGAAGAATCAAGAAGTTTCTTGGTTCATCCAATCAACAATGTCGAATAC
AATGTAATGGTCGGTGATAAACAATTCATAGTGAAGTTGAACTTGGGATCTTGTAGCTGTCGAGTATGGGATTTCCATGAGATTCCTTGTTCTCATGCTCTTGCTGTTCT
TCGAATGTTTAACATAGAAACTTATTCTTATGTGTCTAATTATTATCATTCACAGATATTGTTGTCAACATATTTGGGTTGTGTGCGATCAGTTGGAGTTCATTCAAATT
GGAGGATTGTAAATGACGACGTTCGAGCTTTACCTCCTATTTTTAAACGTCCAGCTGGGAGACCTAAAAAATTAAGAATCCCATCAATTGGTGAAGTTAATAGTAGTCCA
ATAAGATGTAGTAGTTGTCATGGCAAGGGTCATAATTCTAGGACTTGCAAACTTCGTCAAATTAATCAATGA
Protein sequenceShow/hide protein sequence
MESIYPDIRSYLSNVGFEKWSRANSRRRRYDMMTTNPSESVNSILKEDRNLLVARLLDGIREFLQKWFHDRRKASLSMKTILTSWAENILRKQHEESRSFLVHPINNVEY
NVMVGDKQFIVKLNLGSCSCRVWDFHEIPCSHALAVLRMFNIETYSYVSNYYHSQILLSTYLGCVRSVGVHSNWRIVNDDVRALPPIFKRPAGRPKKLRIPSIGEVNSSP
IRCSSCHGKGHNSRTCKLRQINQ