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PI0001045 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001045
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:4316674..4317670
RNA-Seq ExpressionPI0001045
SyntenyPI0001045
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025964.1 uncharacterized protein E6C27_scaffold34G002790 [Cucumis melo var. makuwa]4.1e-3267.21Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA  ETLVDYS+Q KGKKPGP K  GK +K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

KAA0040414.1 uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa]2.4e-3268.03Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA AETLVDYS+Q KGKKPGP K  GK +K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

KAA0040659.1 uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]1.3e-3369.67Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IAVAETLVDYS+Q KGKKPGP K  GKS+K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

KAA0065760.1 polyprotein [Cucumis melo var. makuwa]4.8e-3368.85Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSIL+YVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA AETLVDYS+Q KGKKPGP K  GKS+K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        RRD GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

XP_008455798.1 PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo]4.1e-3267.21Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA  ETLVDYS+Q KGKKPGP K  GK +K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

TrEMBL top hitse value%identityAlignment
A0A1S3C1B3 uncharacterized protein LOC1034958942.0e-3267.21Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA  ETLVDYS+Q KGKKPGP K  GK +K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

A0A5A7SJU9 Uncharacterized protein2.0e-3267.21Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA  ETLVDYS+Q KGKKPGP K  GK +K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

A0A5A7TAA5 Uncharacterized protein1.2e-3268.03Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA AETLVDYS+Q KGKKPGP K  GK +K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

A0A5A7THC0 Reverse transcriptase domain-containing protein6.2e-3469.67Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSILDYVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IAVAETLVDYS+Q KGKKPGP K  GKS+K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        R+D GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

A0A5A7VEX8 Polyprotein2.3e-3368.85Show/hide
Query:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA
        +E RGKLRRLR  GSIL+YVKEFTTLMLEI DL  K+A F FKD LKD AK++LDRRNVQTLD+ IA AETLVDYS+Q KGKKPGP K  GKS+K K+  
Subjt:  MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFK-SGKSEKQKDHA

Query:  RRDSGKEKSFNGKYGKATGNHK
        RRD GK K+F  K GK  G H+
Subjt:  RRDSGKEKSFNGKYGKATGNHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTACGAGGTAAGCTCCGACGCCTTAGACAAATTGGAAGTATTCTCGACTATGTAAAGGAGTTTACCACACTCATGCTAGAGATAGACGATTTGTCCGCAAAAGA
TGCTTTTTTCCATTTTAAGGATGAATTGAAGGATTGTGCTAAGGTGAAACTAGACCGTCGTAATGTGCAAACTCTAGATAACGTCATTGCAGTAGCAGAGACTTTAGTTG
ACTATTCTAGCCAACAAAAGGGAAAGAAGCCTGGTCCATTTAAAAGTGGAAAGAGTGAGAAGCAGAAGGATCATGCCCGACGAGACAGTGGAAAGGAAAAATCCTTCAAC
GGTAAGTATGGCAAGGCTACGGGCAATCATAAAGAGATAGTACTGCATATAAGCCACAACCAGCGCACAACACCATGGGCGCGCCAGCCTGCGCGCAACACCATGTGTGC
GCAAGGCTGGGCACAACATCAGGCACGCAACATCATGGGCGCGCAAGCCATGCGCAGCACCATGCGCCGTGCGAAAGACAGAGGGAAGGGGCTGGCAGAGAAGCTTCTAG
AACTTTCCATGACGGACGGGAAAGTTCCAGAAGGCACGACAATGGTCGAGAAGAGGCTGAGACGCGCGCGTGGGATCCGGAAGGCTCGCGAAAAGGCGCGCGCCTGCTGG
GCGTGTCTAGAGGCATCTAGAACCTTCTATGACGATCGGGAAGTTTCAATGTCGGTCTTGTGTGTCATGAAAGTCCAGAATCATCCTAACCTACCTTTTAAGGCTGTTTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTACGAGGTAAGCTCCGACGCCTTAGACAAATTGGAAGTATTCTCGACTATGTAAAGGAGTTTACCACACTCATGCTAGAGATAGACGATTTGTCCGCAAAAGA
TGCTTTTTTCCATTTTAAGGATGAATTGAAGGATTGTGCTAAGGTGAAACTAGACCGTCGTAATGTGCAAACTCTAGATAACGTCATTGCAGTAGCAGAGACTTTAGTTG
ACTATTCTAGCCAACAAAAGGGAAAGAAGCCTGGTCCATTTAAAAGTGGAAAGAGTGAGAAGCAGAAGGATCATGCCCGACGAGACAGTGGAAAGGAAAAATCCTTCAAC
GGTAAGTATGGCAAGGCTACGGGCAATCATAAAGAGATAGTACTGCATATAAGCCACAACCAGCGCACAACACCATGGGCGCGCCAGCCTGCGCGCAACACCATGTGTGC
GCAAGGCTGGGCACAACATCAGGCACGCAACATCATGGGCGCGCAAGCCATGCGCAGCACCATGCGCCGTGCGAAAGACAGAGGGAAGGGGCTGGCAGAGAAGCTTCTAG
AACTTTCCATGACGGACGGGAAAGTTCCAGAAGGCACGACAATGGTCGAGAAGAGGCTGAGACGCGCGCGTGGGATCCGGAAGGCTCGCGAAAAGGCGCGCGCCTGCTGG
GCGTGTCTAGAGGCATCTAGAACCTTCTATGACGATCGGGAAGTTTCAATGTCGGTCTTGTGTGTCATGAAAGTCCAGAATCATCCTAACCTACCTTTTAAGGCTGTTTA
A
Protein sequenceShow/hide protein sequence
MEVRGKLRRLRQIGSILDYVKEFTTLMLEIDDLSAKDAFFHFKDELKDCAKVKLDRRNVQTLDNVIAVAETLVDYSSQQKGKKPGPFKSGKSEKQKDHARRDSGKEKSFN
GKYGKATGNHKEIVLHISHNQRTTPWARQPARNTMCAQGWAQHQARNIMGAQAMRSTMRRAKDRGKGLAEKLLELSMTDGKVPEGTTMVEKRLRRARGIRKAREKARACW
ACLEASRTFYDDREVSMSVLCVMKVQNHPNLPFKAV