; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001046 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001046
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr04:24759824..24762174
RNA-Seq ExpressionPI0001046
SyntenyPI0001046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041114.1 hypothetical protein E6C27_scaffold128G00170 [Cucumis melo var. makuwa]8.6e-1454.64Show/hide
Query:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIE-RRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR
        SD   +    LPSNTE PNQ  GS KE CQ V L+SGRN T  + K+     STS F  EI ++S+  NPLNFPLTN+ SS QNK V NK+VE+TR+
Subjt:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIE-RRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR

KAA0041246.1 uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa]1.4e-3264.93Show/hide
Query:  NLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIERRNSTSHFIAEIGSTSNNYN
        N +    Q N  LLQSQASSI NLE+QLGQL S++S RP+ SLPSNTE PNQ  GS KE CQ VTLRS RNLTIR+ K ERRNSTS    +IGS SN+ N
Subjt:  NLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIERRNSTSHFIAEIGSTSNNYN

Query:  PLNFPLTNDVSSSQNKDVLNKDVESTRRYEQHDQ
        PLN  LTN+ SS QNK++ NK+VESTRR EQ D+
Subjt:  PLNFPLTNDVSSSQNKDVLNKDVESTRRYEQHDQ

KGN51008.1 hypothetical protein Csa_008461 [Cucumis sativus]2.3e-1157.83Show/hide
Query:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIER
        ME L   YMQ+N  LLQSQASSI NLE+QLGQLA+D+S RP+ +L  NT+ P Q  GS  +  Q VTLRS RNLTI + + E+
Subjt:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIER

TYK21908.1 hypothetical protein E5676_scaffold494G00460 [Cucumis melo var. makuwa]8.6e-1456.12Show/hide
Query:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTK--IERRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR
        SD   + +  LPSNTE PNQ  GS KE CQ V L+SGRN T  + K  +E R STS F  EI ++S+  NPLNFPLTN+ SS QNK V NK+VE+TR+
Subjt:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTK--IERRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR

WP_217833224.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]8.9e-1160.81Show/hide
Query:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNL
        ME LL  YMQKN  L+Q+QASSI NL++QLGQ+A +   R + SLPSNTE P     S KE CQAVTLRSG+ L
Subjt:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNL

TrEMBL top hitse value%identityAlignment
A0A0A0KMN3 Uncharacterized protein5.6e-1161.76Show/hide
Query:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTL
        ME+L   YMQ+N  LLQSQA+SI NLE+Q+GQ+A+D+S +P+ +LPSNTE P Q   S KE CQAVTL
Subjt:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTL

A0A0A0KN83 Uncharacterized protein1.1e-1157.83Show/hide
Query:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIER
        ME L   YMQ+N  LLQSQASSI NLE+QLGQLA+D+S RP+ +L  NT+ P Q  GS  +  Q VTLRS RNLTI + + E+
Subjt:  MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIER

A0A5A7TCC3 Uncharacterized protein4.2e-1454.64Show/hide
Query:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIE-RRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR
        SD   +    LPSNTE PNQ  GS KE CQ V L+SGRN T  + K+     STS F  EI ++S+  NPLNFPLTN+ SS QNK V NK+VE+TR+
Subjt:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIE-RRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR

A0A5A7TGS2 Uncharacterized protein6.8e-3364.93Show/hide
Query:  NLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIERRNSTSHFIAEIGSTSNNYN
        N +    Q N  LLQSQASSI NLE+QLGQL S++S RP+ SLPSNTE PNQ  GS KE CQ VTLRS RNLTIR+ K ERRNSTS    +IGS SN+ N
Subjt:  NLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIERRNSTSHFIAEIGSTSNNYN

Query:  PLNFPLTNDVSSSQNKDVLNKDVESTRRYEQHDQ
        PLN  LTN+ SS QNK++ NK+VESTRR EQ D+
Subjt:  PLNFPLTNDVSSSQNKDVLNKDVESTRRYEQHDQ

A0A5D3DEN2 Uncharacterized protein4.2e-1456.12Show/hide
Query:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTK--IERRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR
        SD   + +  LPSNTE PNQ  GS KE CQ V L+SGRN T  + K  +E R STS F  EI ++S+  NPLNFPLTN+ SS QNK V NK+VE+TR+
Subjt:  SDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTK--IERRNSTSHFIAEIGSTSNNYNPLNFPLTNDVSSSQNKDVLNKDVESTRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCTCCTCTATGTGTATATGCAGAAGAATTATGTCCTTCTGCAAAGTCAAGCTTCATCAATCCACAATCTGGAGGTACAGTTGGGGCAGCTGGCCAGCGATCT
CTCCGGAAGACCACAAAGATCACTCCCTAGTAATACAGAAAAGCCTAATCAGGCGAGAGGATCCAAAAAAGAGAACTGTCAAGCTGTGACACTTCGAAGCGGAAGGAATT
TGACCATCCGCGATACAAAAATCGAACGTAGAAATTCCACTTCTCATTTTATTGCCGAGATCGGCAGCACAAGTAACAATTATAATCCTTTGAATTTTCCTTTAACTAAT
GATGTTTCTTCCTCACAGAATAAAGACGTCCTAAACAAGGATGTGGAGAGCACGAGGCGATATGAACAACACGATCAAGCGAAGCAACTGCAAACGTTGAAAACCTCAGT
TGATAAGTTGCAACGTCCTGCCATCGAATTCCTGATGACGTCCGCCTCTCAAGAGGATGTTAACGATTTGAGGCTCAAGCTTAAGGATCTTTCGACGAGCCATGTCCAAC
TCTCCACTACAGTATCCACCCTCACCTCGCTGGTCATTGCCCAATCAGAGATGATGCGGCAGATAGCTGTGCAACATGATCGACAATTTCGCACGCAGATGGAGTACACT
TACGGGATCCTTGTTCAATGCGTGCCAGCACCGATCATCCCGCCCGAACTTGAAACACCCTTCCCACCACTCGCACGTCTTGGCGACCCTGAACCTCGCCAAGACAATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACCTCCTCTATGTGTATATGCAGAAGAATTATGTCCTTCTGCAAAGTCAAGCTTCATCAATCCACAATCTGGAGGTACAGTTGGGGCAGCTGGCCAGCGATCT
CTCCGGAAGACCACAAAGATCACTCCCTAGTAATACAGAAAAGCCTAATCAGGCGAGAGGATCCAAAAAAGAGAACTGTCAAGCTGTGACACTTCGAAGCGGAAGGAATT
TGACCATCCGCGATACAAAAATCGAACGTAGAAATTCCACTTCTCATTTTATTGCCGAGATCGGCAGCACAAGTAACAATTATAATCCTTTGAATTTTCCTTTAACTAAT
GATGTTTCTTCCTCACAGAATAAAGACGTCCTAAACAAGGATGTGGAGAGCACGAGGCGATATGAACAACACGATCAAGCGAAGCAACTGCAAACGTTGAAAACCTCAGT
TGATAAGTTGCAACGTCCTGCCATCGAATTCCTGATGACGTCCGCCTCTCAAGAGGATGTTAACGATTTGAGGCTCAAGCTTAAGGATCTTTCGACGAGCCATGTCCAAC
TCTCCACTACAGTATCCACCCTCACCTCGCTGGTCATTGCCCAATCAGAGATGATGCGGCAGATAGCTGTGCAACATGATCGACAATTTCGCACGCAGATGGAGTACACT
TACGGGATCCTTGTTCAATGCGTGCCAGCACCGATCATCCCGCCCGAACTTGAAACACCCTTCCCACCACTCGCACGTCTTGGCGACCCTGAACCTCGCCAAGACAATTA
A
Protein sequenceShow/hide protein sequence
MENLLYVYMQKNYVLLQSQASSIHNLEVQLGQLASDLSGRPQRSLPSNTEKPNQARGSKKENCQAVTLRSGRNLTIRDTKIERRNSTSHFIAEIGSTSNNYNPLNFPLTN
DVSSSQNKDVLNKDVESTRRYEQHDQAKQLQTLKTSVDKLQRPAIEFLMTSASQEDVNDLRLKLKDLSTSHVQLSTTVSTLTSLVIAQSEMMRQIAVQHDRQFRTQMEYT
YGILVQCVPAPIIPPELETPFPPLARLGDPEPRQDN