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PI0001064 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001064
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr01:19887456..19888568
RNA-Seq ExpressionPI0001064
SyntenyPI0001064
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.9e-4241.22Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------
        AWLYRQLCKASK+ VREI G LILLQIWAW++F  + PQL HVN + L GRAY S                                             
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------

Query:  ---WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKL-
           W       RQFG +Q +P + NTEPLL NIDLR  DW D+VAHLV+R  +RRRF   G  I+QF  DVTQEYINWY NI +LYIT+PG  +    L 
Subjt:  ---WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKL-

Query:  ----NSMKFTNV---------------------------------EEVLLMTQTQSQTGYGSSMTMMSAFDSGYYDSGV
            N     N+                                 EEV  MTQTQS+  Y S + MM  F + YYDSGV
Subjt:  ----NSMKFTNV---------------------------------EEVLLMTQTQSQTGYGSSMTMMSAFDSGYYDSGV

KAA0035034.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.4e-4340.7Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------
        AWLYRQLC ASK+ VREI G LILLQIWAWE+F  + PQL HVN + L GR Y S                                             
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------

Query:  --------------------WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIM
                            W       RQFG +Q +P + NTEPLLHNIDLR TDW D+VAHLV+R  +RRRF   G  I+QF  DVTQEYINWY NI 
Subjt:  --------------------WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIM

Query:  RLYITRPGDVLEWKKLNSMKFTNV-------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV
        +LYIT+PG  +   + N+++  NV                         EEV  MTQTQ+Q+   Y S + MM  F + YYDSGV
Subjt:  RLYITRPGDVLEWKKLNSMKFTNV-------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-4254.11Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWG-FRQFGFKQDIPSEYN------------TEPLLHNID-LRNTD
        AWLY+QLCKASKR+VR+IDG LILLQIWAWE+F T+ PQL H N+HLLPGRA  S   F        + S+Y              EP    ID L N  
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWG-FRQFGFKQDIPSEYN------------TEPLLHNID-LRNTD

Query:  WLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDV-LEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSSMTMMSAFDSGYYD
        W D+VAHLVVR QSRRRF+ +G  IQQF  DVTQEYI+W            G V +E  +L+ + + NVEEV   TQTQSQTGYGS MTMM  F +GY D
Subjt:  WLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDV-LEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSSMTMMSAFDSGYYD

Query:  SGVCTGY
        S V TGY
Subjt:  SGVCTGY

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.7e-4245.99Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWGFRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQS
        AWLYRQLCKASK+ +REI G LILLQIWAWE+F  + PQL HVN H L GRAY S   RQFG +QD+P   NTEPLLH+IDLR  DW D+VAHLV+R  +
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWGFRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQS

Query:  RRRFIVVGALIQQFHRD-------------------VTQEYINWYNNIMRLYIT---------RPGDVLEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSS
        RRRF   G  I QF  D                   +  +   + +NI  +Y           R   V E  +L  +   ++EEV  +TQT+S+T Y S 
Subjt:  RRRFIVVGALIQQFHRD-------------------VTQEYINWYNNIMRLYIT---------RPGDVLEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSS

Query:  MTMMSAFDSGYYDSGVCTGYLIQKSIHLYRGSWSINF
        M MMSAF +GYYD GV          +   G  S NF
Subjt:  MTMMSAFDSGYYDSGVCTGYLIQKSIHLYRGSWSINF

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.7e-4342.01Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS-WGFR------------------------QFGFKQDIPSEYNTEP
        AWLYRQLCKASK+ VREI G LILLQIWAWE+F  + PQL HVN + L GRAY S W  +                        QFG +Q +P + NTEP
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS-WGFR------------------------QFGFKQDIPSEYNTEP

Query:  LLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKLNSMKFTNV---------------------
        LLHNIDLR  DW D+VAHLV+R  +RRRF   G  I+QF  DVTQEYI+WY NI +LYIT+PG  +   + N+++  NV                     
Subjt:  LLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKLNSMKFTNV---------------------

Query:  ---------------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV
                                         EEV  MTQTQ+Q+   Y   + MM  F + YYDS V
Subjt:  ---------------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV

TrEMBL top hitse value%identityAlignment
A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein1.4e-4241.22Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------
        AWLYRQLCKASK+ VREI G LILLQIWAW++F  + PQL HVN + L GRAY S                                             
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------

Query:  ---WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKL-
           W       RQFG +Q +P + NTEPLL NIDLR  DW D+VAHLV+R  +RRRF   G  I+QF  DVTQEYINWY NI +LYIT+PG  +    L 
Subjt:  ---WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKL-

Query:  ----NSMKFTNV---------------------------------EEVLLMTQTQSQTGYGSSMTMMSAFDSGYYDSGV
            N     N+                                 EEV  MTQTQS+  Y S + MM  F + YYDSGV
Subjt:  ----NSMKFTNV---------------------------------EEVLLMTQTQSQTGYGSSMTMMSAFDSGYYDSGV

A0A5A7SUU1 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-4340.7Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------
        AWLYRQLC ASK+ VREI G LILLQIWAWE+F  + PQL HVN + L GR Y S                                             
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS---------------------------------------------

Query:  --------------------WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIM
                            W       RQFG +Q +P + NTEPLLHNIDLR TDW D+VAHLV+R  +RRRF   G  I+QF  DVTQEYINWY NI 
Subjt:  --------------------WG-----FRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIM

Query:  RLYITRPGDVLEWKKLNSMKFTNV-------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV
        +LYIT+PG  +   + N+++  NV                         EEV  MTQTQ+Q+   Y S + MM  F + YYDSGV
Subjt:  RLYITRPGDVLEWKKLNSMKFTNV-------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV

A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein6.3e-4354.11Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWG-FRQFGFKQDIPSEYN------------TEPLLHNID-LRNTD
        AWLY+QLCKASKR+VR+IDG LILLQIWAWE+F T+ PQL H N+HLLPGRA  S   F        + S+Y              EP    ID L N  
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWG-FRQFGFKQDIPSEYN------------TEPLLHNID-LRNTD

Query:  WLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDV-LEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSSMTMMSAFDSGYYD
        W D+VAHLVVR QSRRRF+ +G  IQQF  DVTQEYI+W            G V +E  +L+ + + NVEEV   TQTQSQTGYGS MTMM  F +GY D
Subjt:  WLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDV-LEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSSMTMMSAFDSGYYD

Query:  SGVCTGY
        S V TGY
Subjt:  SGVCTGY

A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein8.3e-4345.99Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWGFRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQS
        AWLYRQLCKASK+ +REI G LILLQIWAWE+F  + PQL HVN H L GRAY S   RQFG +QD+P   NTEPLLH+IDLR  DW D+VAHLV+R  +
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWGFRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQS

Query:  RRRFIVVGALIQQFHRD-------------------VTQEYINWYNNIMRLYIT---------RPGDVLEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSS
        RRRF   G  I QF  D                   +  +   + +NI  +Y           R   V E  +L  +   ++EEV  +TQT+S+T Y S 
Subjt:  RRRFIVVGALIQQFHRD-------------------VTQEYINWYNNIMRLYIT---------RPGDVLEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSS

Query:  MTMMSAFDSGYYDSGVCTGYLIQKSIHLYRGSWSINF
        M MMSAF +GYYD GV          +   G  S NF
Subjt:  MTMMSAFDSGYYDSGVCTGYLIQKSIHLYRGSWSINF

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.7e-4342.01Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS-WGFR------------------------QFGFKQDIPSEYNTEP
        AWLYRQLCKASK+ VREI G LILLQIWAWE+F  + PQL HVN + L GRAY S W  +                        QFG +Q +P + NTEP
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNS-WGFR------------------------QFGFKQDIPSEYNTEP

Query:  LLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKLNSMKFTNV---------------------
        LLHNIDLR  DW D+VAHLV+R  +RRRF   G  I+QF  DVTQEYI+WY NI +LYIT+PG  +   + N+++  NV                     
Subjt:  LLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVGALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKLNSMKFTNV---------------------

Query:  ---------------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV
                                         EEV  MTQTQ+Q+   Y   + MM  F + YYDS V
Subjt:  ---------------------------------EEVLLMTQTQSQT--GYGSSMTMMSAFDSGYYDSGV

SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog3.9e-0557.89Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTP
        A LYR+LC+ASKR V  I G L+LLQ+WAWE+     P
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTP

Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases2.7e-0657.89Show/hide
Query:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTP
        A LYR+LC+ASKR V  I G L+LLQ+WAWE+     P
Subjt:  AWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCATGGTTGTATAGGCAACTATGCAAAGCATCAAAGCGAAATGTTCGTGAAATCGATGGTCTGTTGATACTTCTTCAAATATGGGCTTGGGAACAATTTTCCAC
AATGACTCCACAACTTCAACATGTCAATGATCATCTACTACCTGGACGGGCATACAATTCATGGGGGTTTAGACAGTTTGGTTTTAAACAAGATATCCCATCAGAATACA
ATACTGAGCCACTTCTTCACAACATTGATCTGAGAAATACGGATTGGTTAGACAAGGTTGCACATTTGGTAGTGCGATGTCAATCTCGTAGAAGATTTATTGTAGTGGGA
GCTTTGATTCAGCAATTCCATAGAGATGTGACTCAAGAATACATCAATTGGTATAATAATATTATGCGGCTCTACATCACTCGACCGGGTGATGTGCTCGAGTGGAAGAA
GTTAAACTCGATGAAGTTTACTAATGTGGAAGAGGTGCTTCTTATGACACAGACCCAAAGCCAGACTGGTTATGGTAGCTCGATGACAATGATGTCAGCATTTGACTCAG
GGTATTATGATTCAGGGGTATGTACAGGATATTTGATTCAGAAGTCGATCCATCTTTATCGTGGATCCTGGTCCATCAACTTCATACATGCATGGACACGGACGGAGCCA
TGGAGAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCATGGTTGTATAGGCAACTATGCAAAGCATCAAAGCGAAATGTTCGTGAAATCGATGGTCTGTTGATACTTCTTCAAATATGGGCTTGGGAACAATTTTCCAC
AATGACTCCACAACTTCAACATGTCAATGATCATCTACTACCTGGACGGGCATACAATTCATGGGGGTTTAGACAGTTTGGTTTTAAACAAGATATCCCATCAGAATACA
ATACTGAGCCACTTCTTCACAACATTGATCTGAGAAATACGGATTGGTTAGACAAGGTTGCACATTTGGTAGTGCGATGTCAATCTCGTAGAAGATTTATTGTAGTGGGA
GCTTTGATTCAGCAATTCCATAGAGATGTGACTCAAGAATACATCAATTGGTATAATAATATTATGCGGCTCTACATCACTCGACCGGGTGATGTGCTCGAGTGGAAGAA
GTTAAACTCGATGAAGTTTACTAATGTGGAAGAGGTGCTTCTTATGACACAGACCCAAAGCCAGACTGGTTATGGTAGCTCGATGACAATGATGTCAGCATTTGACTCAG
GGTATTATGATTCAGGGGTATGTACAGGATATTTGATTCAGAAGTCGATCCATCTTTATCGTGGATCCTGGTCCATCAACTTCATACATGCATGGACACGGACGGAGCCA
TGGAGAACATAA
Protein sequenceShow/hide protein sequence
MSAWLYRQLCKASKRNVREIDGLLILLQIWAWEQFSTMTPQLQHVNDHLLPGRAYNSWGFRQFGFKQDIPSEYNTEPLLHNIDLRNTDWLDKVAHLVVRCQSRRRFIVVG
ALIQQFHRDVTQEYINWYNNIMRLYITRPGDVLEWKKLNSMKFTNVEEVLLMTQTQSQTGYGSSMTMMSAFDSGYYDSGVCTGYLIQKSIHLYRGSWSINFIHAWTRTEP
WRT