CuGenDBv2

Gene ID	PI0001112
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Conserved oligomeric Golgi complex subunit 6
Genome location	chr07:20013605..20014325
RNA-Seq Expression	PI0001112
Synteny	PI0001112
Gene Ontology terms	GO:0006891 - intra-Golgi vesicle-mediated transport (biological process) GO:0015031 - protein transport (biological process) GO:0000139 - Golgi membrane (cellular component) GO:0017119 - Golgi transport complex (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6608028.1 Conserved oligomeric Golgi complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-28

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA E HKSKG+GHISRRGR N+ S Q  NSKSSVDALLS+SSPAPASQ+ ETPSKIFLINCL AIQQP+SGH+VAA+YVKK GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

XP_004142643.1 conserved oligomeric Golgi complex subunit 6 [Cucumis sativus]

3.8e-29

82.22

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA EIHKSKGS HISRRGRTNSGS Q  NSKSSVDALLS+SSPAPA+Q+ ETPSKIFLINCL AIQQPLS H+VAA+YV K GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

XP_008444218.2 PREDICTED: conserved oligomeric Golgi complex subunit 6 [Cucumis melo]

2.6e-30

84.44

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA EIHKSKGS HISRRGRTNSGS Q  NSKSSVDALLS+S PAPASQ+ ETPSKIFLINCL AIQQPLSGH+VAA+YVKK GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

XP_023525183.1 conserved oligomeric Golgi complex subunit 6 [Cucurbita pepo subsp. pepo]

1.1e-28

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA E HKSKG+GHISRRGR N+ S Q  NSKSSVDALLS+SSPAPASQ+ ETPSKIFLINCL AIQQP+SGH+VAA+YVKK GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

XP_038899282.1 conserved oligomeric Golgi complex subunit 6 [Benincasa hispida]

1.1e-31

86.67

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA EIHKSKGSGHISRRGRTNSGSGQ  NSKSSVDALLS+SSPAPASQ+ ETPSKIFLINCL AIQQPLSGH+VAA+YVKK GV+IN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY46 Conserved oligomeric Golgi complex subunit 6

4.3e-31

80.39

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Query:  MIAVNQEAAWPAVCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVM
        MIAVN++     +CEQATEI KSKGSG ISRRGRT SGSGQ  NSKSSVDALLS+SSPA ASQNIETPSKIFLINCL AIQQPLSGH+VAA+YVKK  VM
Subjt:  MIAVNQEAAWPAVCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVM

Query:  IN
        IN
Subjt:  IN

A0A0A0L1U3 Conserved oligomeric Golgi complex subunit 6

1.8e-29

82.22

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA EIHKSKGS HISRRGRTNSGS Q  NSKSSVDALLS+SSPAPA+Q+ ETPSKIFLINCL AIQQPLS H+VAA+YV K GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

A0A1S3BAN8 Conserved oligomeric Golgi complex subunit 6

1.3e-30

84.44

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA EIHKSKGS HISRRGRTNSGS Q  NSKSSVDALLS+S PAPASQ+ ETPSKIFLINCL AIQQPLSGH+VAA+YVKK GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

A0A5A7UEV6 Conserved oligomeric Golgi complex subunit 6

1.3e-30

84.44

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA EIHKSKGS HISRRGRTNSGS Q  NSKSSVDALLS+S PAPASQ+ ETPSKIFLINCL AIQQPLSGH+VAA+YVKK GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

A0A6J1IV23 Conserved oligomeric Golgi complex subunit 6

5.3e-29

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN
        +CEQA E HKSKG+GHISRRGR N+ S Q  NSKSSVDALLS+SSPAPASQ+ ETPSKIFLINCL AIQQP+SGH+VAA+YVKK GVMIN
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

SwissProt top hits

e value

%identity

Alignment

Q6NMI3 Conserved oligomeric Golgi complex subunit 6

9.0e-18

64.04

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMI
        +CEQA E HKSK SG + RR RT+S S Q     +SVDALLS SSP+P  QN ETPSKIFLINCL AIQQPL  H VA+ YV   G+MI
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMI

Arabidopsis top hits

e value

%identity

Alignment

AT1G31780.1 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).

6.4e-19

64.04

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Query:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMI
        +CEQA E HKSK SG + RR RT+S S Q     +SVDALLS SSP+P  QN ETPSKIFLINCL AIQQPL  H VA+ YV   G+MI
Subjt:  VCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMI

Sequences

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CDS sequence

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ATGATAGCAGTGAACCAAGAAGCAGCATGGCCGGCTGTATGTGAGCAAGCAACAGAGATTCACAAGTCTAAGGGATCTGGCCACATATCAAGAAGGGGTAGGACGAATTC
TGGTTCCGGTCAGAATAGCAATAGCAAATCATCAGTAGATGCACTATTGTCCGAAAGCAGCCCTGCTCCAGCCTCTCAGAACATTGAAACTCCTTCTAAGATCTTTCTGA
TCAACTGTCTACGTGCCATCCAACAACCATTATCTGGCCACAAGGTTGCAGCTGATTATGTCAAGAAACGTGGAGTAATGATAAATTAG

mRNA sequence

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Protein sequence

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MIAVNQEAAWPAVCEQATEIHKSKGSGHISRRGRTNSGSGQNSNSKSSVDALLSESSPAPASQNIETPSKIFLINCLRAIQQPLSGHKVAADYVKKRGVMIN

PI0001112 (gene) of Melon (PI 482460) v1 genome