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PI0001180 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001180
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDUF4228 domain-containing protein
Genome locationchr12:3987175..3988005
RNA-Seq ExpressionPI0001180
SyntenyPI0001180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056859.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]1.7e-5494.87Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEV
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG +KEAASCSQP VKIKMTKRELEVLVKKLEMQGL+LEQVIGRMMKGEEE+E+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEV

Query:  EHHRSWRPSLQSIPEDY
        EHHRSWRPSLQSIPEDY
Subjt:  EHHRSWRPSLQSIPEDY

KAE8652667.1 hypothetical protein Csa_013180 [Cucumis sativus]6.4e-4993.75Show/hide
Query:  SQSSTMVFAGDDWGSFSSKHGRGCGGN--ATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRS
        SQSSTMVFAGDDWGSFSSKHGRGCG N  A TSGGDPEKHRLLGEKEA SCSQP VKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFE+EHHRS
Subjt:  SQSSTMVFAGDDWGSFSSKHGRGCGGN--ATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRS

Query:  WRPSLQSIPEDY
        WRPSLQSIPEDY
Subjt:  WRPSLQSIPEDY

XP_008446374.1 PREDICTED: uncharacterized protein LOC103489132 [Cucumis melo]1.6e-4794.34Show/hide
Query:  MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSLQ
        MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG +KEAASCSQP VKIKMTKRELEVLVKKLEMQGL+LEQVIGRMMKGEEE+E+EHHRSWRPSLQ
Subjt:  MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSLQ

Query:  SIPEDY
        SIPEDY
Subjt:  SIPEDY

XP_011652689.2 uncharacterized protein LOC105435046 [Cucumis sativus]1.7e-4693.46Show/hide
Query:  MVFAGDDWGSFSSKHGRGCGGN--ATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSL
        MVFAGDDWGSFSSKHGRGCG N  A TSGGDPEKHRLLGEKEA SCSQP VKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFE+EHHRSWRPSL
Subjt:  MVFAGDDWGSFSSKHGRGCGGN--ATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSL

Query:  QSIPEDY
        QSIPEDY
Subjt:  QSIPEDY

XP_038895954.1 uncharacterized protein LOC120084128 [Benincasa hispida]1.8e-5192.31Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRM-MKGEEEFEV
        MGNCCRSQSSTMVF GDDWGSFSSKHGRG GGNATTSGGDPEK+RLLGEKEAASCSQPQVKIKM+KRELE LVKKLEMQG+SLEQVIGRM M GE+EFEV
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRM-MKGEEEFEV

Query:  EHHRSWRPSLQSIPEDY
        EHHRSWRPSLQSIPEDY
Subjt:  EHHRSWRPSLQSIPEDY

TrEMBL top hitse value%identityAlignment
A0A0A0LRL1 Uncharacterized protein9.2e-5494.07Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGN--ATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFE
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCG N  A TSGGDPEKHRLLGEKEA SCSQP VKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFE
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGN--ATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFE

Query:  VEHHRSWRPSLQSIPEDY
        +EHHRSWRPSLQSIPEDY
Subjt:  VEHHRSWRPSLQSIPEDY

A0A1S3BEX3 uncharacterized protein LOC1034891327.6e-4894.34Show/hide
Query:  MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSLQ
        MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG +KEAASCSQP VKIKMTKRELEVLVKKLEMQGL+LEQVIGRMMKGEEE+E+EHHRSWRPSLQ
Subjt:  MVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSLQ

Query:  SIPEDY
        SIPEDY
Subjt:  SIPEDY

A0A5A7UTK3 DUF4228 domain-containing protein8.4e-5594.87Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEV
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG +KEAASCSQP VKIKMTKRELEVLVKKLEMQGL+LEQVIGRMMKGEEE+E+
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLG-EKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEV

Query:  EHHRSWRPSLQSIPEDY
        EHHRSWRPSLQSIPEDY
Subjt:  EHHRSWRPSLQSIPEDY

A0A6J1EYG4 uncharacterized protein LOC1114400571.4e-4684.21Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVE
        MGNCCRSQSSTM+FAGDDWGSFSSKHGRG GGNA+TS GDPEK+RLLGEK+ +SC QPQVKIKMTKRELE LVK LE++GLSLEQVIGRMM  E+EF+ E
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

A0A6J1KIA5 uncharacterized protein LOC1114954857.1e-4684.21Show/hide
Query:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVE
        MGNCCRSQSSTMVFAGDDWGSFSSKHGRG GGNA+ S GDPEK+RLLGEK+ +SC QPQVKIKMTKRELE LVK LE++GLSLEQVIGRMM  E+EF+ E
Subjt:  MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVE

Query:  HHRSWRPSLQSIPE
        HHRSWRPSLQSIPE
Subjt:  HHRSWRPSLQSIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21920.1 unknown protein1.8e-0931.78Show/hide
Query:  MGNC-CRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGE-------KEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMM-
        MGNC C ++ +T  ++GDD GS++ +  R           D EK  LLGE         ++S  + ++KI++TK+ELE L++ + ++ L+ E+++ +++ 
Subjt:  MGNC-CRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGE-------KEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMM-

Query:  KGEEEF------EVEHHRSWRPSLQSIPE
        +G ++          HH+ W+P LQSIPE
Subjt:  KGEEEF------EVEHHRSWRPSLQSIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACTGTTGCCGCAGCCAATCCTCTACAATGGTCTTCGCCGGTGACGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCGGAAACGCCACAACCTC
CGGCGGCGATCCAGAGAAGCATAGATTACTTGGAGAGAAGGAAGCGGCGTCGTGTTCGCAGCCGCAAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTTTGGTGA
AGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATCGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCTCTTCAA
AGTATTCCAGAGGATTACTGA
mRNA sequenceShow/hide mRNA sequence
TTTAAACAAAAAATTTCCCCTAATTTCCAAATCCCAAAATCGAAATCATTTCGTAAAAAAAAAAAAAAGAAAAAGAACGAAGATATATAACACAAGAAAGAAATCATAGT
AATGGGCAACTGTTGCCGCAGCCAATCCTCTACAATGGTCTTCGCCGGTGACGATTGGGGCTCCTTCAGTTCCAAGCACGGGCGTGGTTGCGGCGGAAACGCCACAACCT
CCGGCGGCGATCCAGAGAAGCATAGATTACTTGGAGAGAAGGAAGCGGCGTCGTGTTCGCAGCCGCAAGTGAAAATCAAGATGACGAAGAGAGAGCTTGAGGTTTTGGTG
AAGAAGCTGGAGATGCAAGGATTGAGTCTAGAACAAGTTATCGGGCGGATGATGAAGGGTGAAGAAGAATTTGAAGTTGAGCATCATCGATCATGGAGGCCTTCTCTTCA
AAGTATTCCAGAGGATTACTGATTGTGTAAAAAGAAGATAAGGAAAGGAAATTTGTTGATTGGTTTTGTACAAAATTTGATCCGTTGTTAGTTATTGAGATTTGTTTTGG
TTGTATATGAAAATTGGCTGCCGTATTTTGTAAATTTCAGGGCAGATTTGTATTTATTGGAAGGTTAAGAAGCATGTGAGGAAAGATTAAGGATGAATTTCAGATTTGGA
TTCAGATTTATTAAAACTTAGGGTTGATTTGTAGGAGGTGTTATTAATCATGAGCGTTATGGTTACAATTTTGGGAAAGCTTGCCTCGATTCTCGAACAAAAGCTTCAAA
TCATCCCGATGGCGTCCATTAAGGATTTATTTTATTTTATTTTTACACCTGTCCTTTATTA
Protein sequenceShow/hide protein sequence
MGNCCRSQSSTMVFAGDDWGSFSSKHGRGCGGNATTSGGDPEKHRLLGEKEAASCSQPQVKIKMTKRELEVLVKKLEMQGLSLEQVIGRMMKGEEEFEVEHHRSWRPSLQ
SIPEDY