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PI0001182 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001182
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationchr09:1535790..1536673
RNA-Seq ExpressionPI0001182
SyntenyPI0001182
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1775Show/hide
Query:  MAVVAHKVPFG---GILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYIS
        MAVVA+K+PFG   G++FV+A++L    P  AQSL+PAQPPA SDGTSIDQGIAYVLMLLALVLTYIIHSADL IS
Subjt:  MAVVAHKVPFG---GILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYIS

KAG7017004.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1776.71Show/hide
Query:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYIS
        MAVVA+K+PF G+ F V  VL  + P  AQSL+PAQPPA SDGTSIDQGIAYVLMLLALVLTYIIHSADL IS
Subjt:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYIS

XP_004143956.1 arabinogalactan protein 41 [Cucumis sativus]2.4e-2593.24Show/hide
Query:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        MAVVA KVPFGGILFVVALVLTRLS  YAQSLSPAQPPAT DGTSIDQGIAYVLMLLALVLTYIIHSADLY+SL
Subjt:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

XP_008437371.1 PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]1.0e-2389.19Show/hide
Query:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        MAVVA K+PF GILFVVALVLTRLSP  AQSLSPAQPPATSDGTSIDQGIAY LMLLALVLTYIIHSAD Y+SL
Subjt:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

XP_022996281.1 arabinogalactan peptide 22-like [Cucurbita maxima]6.8e-1268.83Show/hide
Query:  MAVVAH-KVPFGGILFVVALVLTRLSPVYA--QSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        M VVA+ KVP+ G+L  VA VL  L P  A   SLSPAQPP  SDGTS+DQGIAYVLMLLAL+LTYIIH A+L ISL
Subjt:  MAVVAH-KVPFGGILFVVALVLTRLSPVYA--QSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein1.2e-2593.24Show/hide
Query:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        MAVVA KVPFGGILFVVALVLTRLS  YAQSLSPAQPPAT DGTSIDQGIAYVLMLLALVLTYIIHSADLY+SL
Subjt:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

A0A1S3ATI9 arabinogalactan peptide 22-like4.9e-2489.19Show/hide
Query:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        MAVVA K+PF GILFVVALVLTRLSP  AQSLSPAQPPATSDGTSIDQGIAY LMLLALVLTYIIHSAD Y+SL
Subjt:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

A0A5D3C2F1 Arabinogalactan peptide 22-like4.9e-2489.19Show/hide
Query:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        MAVVA K+PF GILFVVALVLTRLSP  AQSLSPAQPPATSDGTSIDQGIAY LMLLALVLTYIIHSAD Y+SL
Subjt:  MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

A0A6J1CXM0 arabinogalactan peptide 22-like6.2e-1164.1Show/hide
Query:  MAVVAHKVPFGGILFV-VALVLTRLSPVYA----QSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYIS
        +  V + +P G ++ V VA VL    PV A    +S+SPAQP ATSDGTSIDQGIAY LMLLALVLTYIIHSADL IS
Subjt:  MAVVAHKVPFGGILFV-VALVLTRLSPVYA----QSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYIS

A0A6J1K4A3 arabinogalactan peptide 22-like3.3e-1268.83Show/hide
Query:  MAVVAH-KVPFGGILFVVALVLTRLSPVYA--QSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL
        M VVA+ KVP+ G+L  VA VL  L P  A   SLSPAQPP  SDGTS+DQGIAYVLMLLAL+LTYIIH A+L ISL
Subjt:  MAVVAH-KVPFGGILFVVALVLTRLSPVYA--QSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 162.8e-0865.45Show/hide
Query:  FVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD
        FV A++   LS   AQSL+PA P  TSDGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  FVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD

Q8L9T8 Arabinogalactan protein 419.5e-0960.34Show/hide
Query:  FGGILFVVALVLTRLSPV-YAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH
        F G+  +V+++   L P+ +AQS +PA P  TSDGT+IDQGIAYVLML+ALVLTY+IH
Subjt:  FGGILFVVALVLTRLSPV-YAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH

Q9FK16 Arabinogalactan protein 222.0e-0655.56Show/hide
Query:  ILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH
        IL V  ++   L P+     S   P  TSDGTSIDQGIAYVLM++AL LTY IH
Subjt:  ILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH

Q9M373 Arabinogalactan protein 203.6e-0860.34Show/hide
Query:  ILFVVALVLTRLSP-VYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD
        ++ + A V   +SP   AQSL+PA P  TSDGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  ILFVVALVLTRLSP-VYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 162.0e-0965.45Show/hide
Query:  FVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD
        FV A++   LS   AQSL+PA P  TSDGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  FVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD

AT3G61640.1 arabinogalactan protein 202.6e-0960.34Show/hide
Query:  ILFVVALVLTRLSP-VYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD
        ++ + A V   +SP   AQSL+PA P  TSDGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  ILFVVALVLTRLSP-VYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSAD

AT5G24105.1 arabinogalactan protein 416.7e-1060.34Show/hide
Query:  FGGILFVVALVLTRLSPV-YAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH
        F G+  +V+++   L P+ +AQS +PA P  TSDGT+IDQGIAYVLML+ALVLTY+IH
Subjt:  FGGILFVVALVLTRLSPV-YAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH

AT5G53250.1 arabinogalactan protein 221.4e-0755.56Show/hide
Query:  ILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH
        IL V  ++   L P+     S   P  TSDGTSIDQGIAYVLM++AL LTY IH
Subjt:  ILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTTGCTCATAAGGTCCCTTTTGGTGGGATTTTGTTTGTTGTTGCTTTAGTTTTGACGAGGCTTTCCCCTGTTTACGCTCAATCGTTGTCTCCGGCTCAACC
GCCTGCTACTAGCGACGGAACTAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTATATCAGTT
TATAA
mRNA sequenceShow/hide mRNA sequence
AAAGGAAGCCCTATTGACTATTTCAAGAAAACCCAATAAAAGAGTATGAAATGGGCGATTTAAACGGACATTGCAGTTGGTGGTTACAACATTCCAAATCAAATGAGGCT
ATAAAATCCATAGCCCCATTGATTGAGAGGCACACCGCCATTGCCACGCCGTCACCGCCGTCGTCTACACAGGGACTGTCAATTGGAGGGTTTGGCTAGTCCTCTCCCCC
CATCCCCTTTTGACAGTTTCAAATCATTTATCAATTCACGGCCTAAATACTTTAATTTTCTAATAATATCTCTCTCTGCTACGCCTCTCCTGACCTTTCTTCTCAATTTT
TTCAATTATTGAGAGACGTTGCAGAGAGAGAGAGAGAGTTCTCATTCCTTCTTTTACTAATTTTCCATTACAAGCTTCTCCTTTTTTCAACATGGCGGTCGTTGCTCATA
AGGTCCCTTTTGGTGGGATTTTGTTTGTTGTTGCTTTAGTTTTGACGAGGCTTTCCCCTGTTTACGCTCAATCGTTGTCTCCGGCTCAACCGCCTGCTACTAGCGACGGA
ACTAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTATATCAGTTTATAAGTTCATTCACCAAA
CTAATTCAGATTCAGATTTCACAGAGCTGAAATGTAAAATGGGGTTAAAGAATTTATCATAGGGAAATATGATCTCATGTCTTAAACTCTTTACATGTAAATGAATGAAA
ATGATAATTTCTTTTA
Protein sequenceShow/hide protein sequence
MAVVAHKVPFGGILFVVALVLTRLSPVYAQSLSPAQPPATSDGTSIDQGIAYVLMLLALVLTYIIHSADLYISL