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PI0001184 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001184
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:9237125..9237370
RNA-Seq ExpressionPI0001184
SyntenyPI0001184
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-2573.75Show/hide
Query:  DFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        +F N+QL  I DWPKEKRATEVELR EVVKQLQDIP+L S+DR KLM+I+F SV+  +GFLS+PT+LKLEYCNILLE NV
Subjt:  DFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.3e-2474.36Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLE
        ++F N+QL AIA+WPKEKRATEVELRAEV+KQLQDIPEL SRDR KL++I+F SV+  +GFLS+PTE KLEYCNILL+
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLE

KAA0063430.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.6e-2574.07Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        M+F N+QL AIA+WPKEKRATEVEL  EVVKQLQDIPEL S+DR KLM+I+F SV+  +GFLS+P ELKLEYCNILL+ NV
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

KAA0065769.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.0e-2474.07Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        M+F N+QL AIADW KEKRATEVEL A VVKQLQDIP+L SRDR KLM+I+F SV+   GFLS+PT+LKLEYCN+LLE NV
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.7e-2471.6Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        M+F N QL AIADWPKEKRA EVE+RA+VVKQLQDIP+L S+DR KLM+I+F S++  +GFLS+PTELKLEYCNILL+  V
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

TrEMBL top hitse value%identityAlignment
A0A0A0KFW0 Uncharacterized protein4.8e-2574.07Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        M+  N+QL AIA+W KEKRATEVEL  EVVKQLQDI EL +RDRVKLM+IIFH VDD +GFLS PT+LKLEYC +LLE+NV
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

A0A5A7SQU2 Putative nuclease HARBI16.3e-2574.36Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLE
        ++F N+QL AIA+WPKEKRATEVELRAEV+KQLQDIPEL SRDR KL++I+F SV+  +GFLS+PTE KLEYCNILL+
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLE

A0A5A7V8C5 Putative nuclease HARBI11.3e-2574.07Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        M+F N+QL AIA+WPKEKRATEVEL  EVVKQLQDIPEL S+DR KLM+I+F SV+  +GFLS+P ELKLEYCNILL+ NV
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

A0A5D3BBW3 Putative nuclease HARBI14.8e-2574.07Show/hide
Query:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        M+F N+QL AIADW KEKRATEVEL A VVKQLQDIP+L SRDR KLM+I+F SV+   GFLS+PT+LKLEYCN+LLE NV
Subjt:  MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

A0A5D3BZU3 Retrotransposon protein1.3e-2573.75Show/hide
Query:  DFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV
        +F N+QL  I DWPKEKRATEVELR EVVKQLQDIP+L S+DR KLM+I+F SV+  +GFLS+PT+LKLEYCNILLE NV
Subjt:  DFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTTGCAAACAATCAATTGAACGCAATTGCAGATTGGCCAAAAGAAAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGATATCCC
TGAACTATGGAGTCGAGATAGGGTAAAGCTCATGCGAATCATATTCCATAGTGTGGATGACACACAGGGATTCTTGTCTGTCCCAACAGAACTTAAATTGGAATATTGCA
ATATTCTCTTGGAAGAAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTTTGCAAACAATCAATTGAACGCAATTGCAGATTGGCCAAAAGAAAAGCGTGCAACAGAGGTCGAATTGCGTGCTGAAGTCGTGAAACAACTGCAAGATATCCC
TGAACTATGGAGTCGAGATAGGGTAAAGCTCATGCGAATCATATTCCATAGTGTGGATGACACACAGGGATTCTTGTCTGTCCCAACAGAACTTAAATTGGAATATTGCA
ATATTCTCTTGGAAGAAAATGTTTGA
Protein sequenceShow/hide protein sequence
MDFANNQLNAIADWPKEKRATEVELRAEVVKQLQDIPELWSRDRVKLMRIIFHSVDDTQGFLSVPTELKLEYCNILLEENV