; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001228 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001228
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type domain-containing protein
Genome locationchr06:24072026..24074095
RNA-Seq ExpressionPI0001228
SyntenyPI0001228
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577374.1 RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2265.33Show/hide
Query:  ERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        E NR IQ+AMEKLTKPS  YDYE+++++ S LS+C ICLE+      CRVFPNCKH+FHTHCI+ WL INQTCP+
Subjt:  ERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

KAG6600728.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1960.49Show/hide
Query:  LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        + P E N Q    MEKLT P   Y  +END   + S L+EC ICLE  G RVSCRVFPNCKH+FHTHCII WL IN TCP+
Subjt:  LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

KAG7031368.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-1960.49Show/hide
Query:  LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        + P E N Q    MEKLT P   Y  +END   + S L+EC ICLE  G RVSCRVFPNCKH+FHTHCII WL IN TCP+
Subjt:  LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]2.5e-3685.88Show/hide
Query:  MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAK
        M+  P ERNRQ+QMAMEKLTKPSAYY+ EEND+SPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCP+   K
Subjt:  MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAK

XP_023545744.1 RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo]9.7e-2062.96Show/hide
Query:  LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        + P E N QI  AMEKLT P   Y  +END   + S L+EC ICLE  G RVSCRVFPNCKH+FHTHCII WL IN TCP+
Subjt:  LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

TrEMBL top hitse value%identityAlignment
A0A067FG84 RING-type domain-containing protein2.2e-0944.74Show/hide
Query:  GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        GER  Q Q A+EKL     Y     + +  S   +C+ICL+D  +   CRVFP CKHIFH  CI +WL    TCP+
Subjt:  GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

A0A0A0L7Y8 RING-type domain-containing protein1.2e-3983.67Show/hide
Query:  MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM---LNAKYFMLFNKFSI
        MLLQPGERNRQ+QMAMEKLTKPSAYY+ EEND+SPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCP+   +NA+ F L  KF +
Subjt:  MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM---LNAKYFMLFNKFSI

A0A2H5P674 RING-type domain-containing protein2.2e-0944.74Show/hide
Query:  GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        GER  Q Q A+EKL     Y     + +  S   +C+ICL+D  +   CRVFP CKHIFH  CI +WL    TCP+
Subjt:  GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

A0A5D2W4C4 RING-type domain-containing protein1.7e-0952.17Show/hide
Query:  QMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        Q A+EKL  P AY      DK     SEC ICL+D     SCRVFP+CKHIFH  CI +WL+ + TCP+
Subjt:  QMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

V4WEW6 RING-type domain-containing protein1.7e-0944.74Show/hide
Query:  GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        GER  Q Q A+EKL     Y     + +  S   +C+ICL+D  +   CRVFP CKHIFH  CI +WL    TCP+
Subjt:  GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

SwissProt top hitse value%identityAlignment
Q8LF65 RING-H2 finger protein ATL178.8e-0843.48Show/hide
Query:  ECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAK
        EC++CL +  +  S RV PNCKH FH HCI  W   + +CP+  ++
Subjt:  ECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAK

Q8RX29 RING-H2 finger protein ATL701.5e-0746.94Show/hide
Query:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        K P+T S C ICL D   +   R  P+C H+FH  CI  WL +N TCP+
Subjt:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

Q8RXX9 E3 ubiquitin-protein ligase ATL68.8e-0838.46Show/hide
Query:  TKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNA
        T P+  Y   +  K      EC ICL +  +  + R+ P C H+FH HCI  WLE + TCP+  A
Subjt:  TKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNA

Q9FG21 Putative RING-H2 finger protein ATL712.6e-0744.9Show/hide
Query:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        K  ST S C+ICL D  +    RV P+C H+FH +C+  WL ++ TCP+
Subjt:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

Q9SLC4 RING-H2 finger protein ATL401.2e-0746.51Show/hide
Query:  SECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        +EC +CL  L E+ + R+ PNCKH+FH  C+  WL    TCP+
Subjt:  SECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

Arabidopsis top hitse value%identityAlignment
AT1G53010.1 RING/U-box superfamily protein2.4e-0842.59Show/hide
Query:  DYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCP
        ++EE+++      EC ICL        CRVFP C+HI+H  CI  WL+ + TCP
Subjt:  DYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCP

AT2G35910.1 RING/U-box superfamily protein1.1e-0846.94Show/hide
Query:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        K P+T S C ICL D   +   R  P+C H+FH  CI  WL +N TCP+
Subjt:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

AT2G42350.1 RING/U-box superfamily protein8.2e-0946.51Show/hide
Query:  SECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        +EC +CL  L E+ + R+ PNCKH+FH  C+  WL    TCP+
Subjt:  SECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM

AT3G05200.1 RING/U-box superfamily protein6.3e-0938.46Show/hide
Query:  TKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNA
        T P+  Y   +  K      EC ICL +  +  + R+ P C H+FH HCI  WLE + TCP+  A
Subjt:  TKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNA

AT5G06490.1 RING/U-box superfamily protein1.8e-0844.9Show/hide
Query:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM
        K  ST S C+ICL D  +    RV P+C H+FH +C+  WL ++ TCP+
Subjt:  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTGCAACCGGGGGAGCGGAATCGTCAAATTCAAATGGCGATGGAGAAGTTGACGAAGCCATCAGCATATTATGATTACGAAGAGAATGATAAATCTCCATCGAC
ATTGAGTGAATGCACGATATGTTTGGAGGATCTTGGAGAAAGAGTTTCGTGTCGAGTTTTTCCTAATTGCAAGCATATATTCCATACACATTGCATAATCAATTGGTTAG
AGATTAATCAAACTTGTCCAATGTTAAATGCTAAATATTTTATGTTATTTAATAAATTTTCTATTGAGATATTGTTCAATAAATTGTTATTGAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTGCAACCGGGGGAGCGGAATCGTCAAATTCAAATGGCGATGGAGAAGTTGACGAAGCCATCAGCATATTATGATTACGAAGAGAATGATAAATCTCCATCGAC
ATTGAGTGAATGCACGATATGTTTGGAGGATCTTGGAGAAAGAGTTTCGTGTCGAGTTTTTCCTAATTGCAAGCATATATTCCATACACATTGCATAATCAATTGGTTAG
AGATTAATCAAACTTGTCCAATGTTAAATGCTAAATATTTTATGTTATTTAATAAATTTTCTATTGAGATATTGTTCAATAAATTGTTATTGAATGAATGA
Protein sequenceShow/hide protein sequence
MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAKYFMLFNKFSIEILFNKLLLNE