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PI0001255 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001255
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:11598841..11600528
RNA-Seq ExpressionPI0001255
SyntenyPI0001255
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032001.1 uncharacterized protein E6C27_scaffold134G00970 [Cucumis melo var. makuwa]4.3e-1278Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKK
        MKQQ++ LTTAI K++GKGKLSAQPDHAN+SAISLRSGKIL+TP ++EKK
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKK
KAA0062400.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-1170.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKL AQPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
KAA0066512.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-1170.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKLS QPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-1170.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKL AQPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
TYK26581.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.6e-1170.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKL AQPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
TrEMBL top hitse value%identityAlignment
A0A5A7V594 Retrotransposon gag protein7.9e-1270.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKL AQPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
A0A5D3C4I5 Retrotransposon gag protein6.1e-1270.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKLS QPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
A0A5D3CFE7 Retrotransposon gag protein7.9e-1270.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKL AQPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
A0A5D3CZ23 Retrotrans_gag domain-containing protein2.1e-1278Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKK
        MKQQ++ LTTAI K++GKGKLSAQPDHAN+SAISLRSGKIL+TP ++EKK
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKK
A0A5D3DS57 Retrotransposon gag protein7.9e-1270.37Show/hide
Query:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
        MKQQ++ LTTAI K++GKGKL AQPDHAN+SAISLRSGKIL+TP ++EKK   +
Subjt:  MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAACAAATTTCTCATCTCACAACCGCAATTGGTAAGCTAGAAGGAAAAGGTAAACTTTCGGCCCAACCGGATCATGCAAATATAAGTGCCATCTCACTTAGAAG
TGGTAAAATTCTTGAAACCCCTCCAAGTGAAGAAAAAAAGGCAAATAAGAGGTATTCACACGAACAAGCTTCAAGCGAGGAACCACGCGGGCAACCAGGCGACCTTGAAC
GCATGGTTAGGCGGACCGGAGCTATAGCCGACAAGCTAGCCCGTGTAGATGTCAGAAAAGGACACCTGCATCAATGTTGCAGGTGGCAGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAACAAATTTCTCATCTCACAACCGCAATTGGTAAGCTAGAAGGAAAAGGTAAACTTTCGGCCCAACCGGATCATGCAAATATAAGTGCCATCTCACTTAGAAG
TGGTAAAATTCTTGAAACCCCTCCAAGTGAAGAAAAAAAGGCAAATAAGAGGTATTCACACGAACAAGCTTCAAGCGAGGAACCACGCGGGCAACCAGGCGACCTTGAAC
GCATGGTTAGGCGGACCGGAGCTATAGCCGACAAGCTAGCCCGTGTAGATGTCAGAAAAGGACACCTGCATCAATGTTGCAGGTGGCAGAAGAATTAA
Protein sequenceShow/hide protein sequence
MKQQISHLTTAIGKLEGKGKLSAQPDHANISAISLRSGKILETPPSEEKKANKRYSHEQASSEEPRGQPGDLERMVRRTGAIADKLARVDVRKGHLHQCCRWQKN