; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001270 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001270
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:23760000..23760209
RNA-Seq ExpressionPI0001270
SyntenyPI0001270
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.5e-1773.13Show/hide
Query:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLS
        MDTD A+ NI NIC MKHLQ  QI KSTNKN+R KR++ N+E RVD +NQLEIDDVRV+EHIDFLLS
Subjt:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLS

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.6e-1571.88Show/hide
Query:  ALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLSFK
        AL NITNIC MKHLQ  QI KSTNKN+R KR++ N+EFRV+ DNQL+ID+V+V+EHIDFLLS K
Subjt:  ALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLSFK

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.7e-1273.21Show/hide
Query:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDV
        MD D A+ NITNIC MKHLQ  QI KSTNKN+R KR++ N+EFRVD DNQLEIDDV
Subjt:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDV

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-1571.88Show/hide
Query:  ALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLSFK
        AL NITNIC MKHLQ  QI KSTNKN+R KR++ N+EFRV+ DNQL+ID+V+V+EHIDFLLS K
Subjt:  ALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLSFK

A0A5A7TI03 Stress-response A/B barrel domain-containing protein6.8e-0471.43Show/hide
Query:  QIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVR
        QI KSTNKN+R KR+Q N+EF+VD DNQLEIDD++
Subjt:  QIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVR

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-1273.21Show/hide
Query:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDV
        MD D A+ NITNIC MKHLQ  QI KSTNKN+R KR++ N+EFRVD DNQLEIDDV
Subjt:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.1e-1773.13Show/hide
Query:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLS
        MDTD A+ NI NIC MKHLQ  QI KSTNKN+R KR++ N+E RVD +NQLEIDDVRV+EHIDFLLS
Subjt:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLS

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X28.9e-0460.98Show/hide
Query:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNL
        MD D  + NITNIC MKHLQ  QI KSTNKN+R KR++ ++
Subjt:  MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGGACGCTGCCTTGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCTCAGATCCACAAGAGTACCAACAAAAACAAGAGAATCAAGAGAAG
CCAGGGTAACCTAGAGTTCAGAGTCGACAACGACAACCAGCTCGAAATCGACGACGTCCGGGTTATGGAACACATTGATTTTCTTTTATCTTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGGACGCTGCCTTGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCTCAGATCCACAAGAGTACCAACAAAAACAAGAGAATCAAGAGAAG
CCAGGGTAACCTAGAGTTCAGAGTCGACAACGACAACCAGCTCGAAATCGACGACGTCCGGGTTATGGAACACATTGATTTTCTTTTATCTTTTAAATGA
Protein sequenceShow/hide protein sequence
MDTDAALENITNICTMKHLQTSQIHKSTNKNKRIKRSQGNLEFRVDNDNQLEIDDVRVMEHIDFLLSFK