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PI0001289 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001289
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein precursor Ycf15, putative, chloroplast
Genome locationchr01:17380233..17380397
RNA-Seq ExpressionPI0001289
SyntenyPI0001289
Gene Ontology termsGO:0009536 - plastid (cellular component)
InterPro domainsIPR019645 - Uncharacterised protein family Ycf15


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHE50545.1 hypothetical chloroplast RF15 [Staphylea trifolia]5.1e-1773.77Show/hide
Query:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS         +KK  LMKDVNPLEN KYACRMKW LLS  ITNHWFN
Subjt:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
SPO52014.1 hypothetical chloroplast RF15 [Quercus robur]9.3e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
YP_007375088.1 hypothetical chloroplast RF15 [Quercus rubra]9.3e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
YP_007375107.1 hypothetical chloroplast RF15 [Quercus rubra]9.3e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
YP_009939017.1 hypothetical chloroplast RF15 [Turpinia arguta]5.1e-1773.77Show/hide
Query:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS         +KK  LMKDVNPLEN KYACRMKW LLS  ITNHWFN
Subjt:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
TrEMBL top hitse value%identityAlignment
A0A6B9Q9L5 Hypothetical chloroplast RF152.5e-1773.77Show/hide
Query:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS         +KK  LMKDVNPLEN KYACRMKW LLS  ITNHWFN
Subjt:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
A0A7U3K6X2 Hypothetical chloroplast RF154.5e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
A0A7U3K766 Hypothetical chloroplast RF154.5e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
L7T929 Hypothetical chloroplast RF154.5e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
L7TBC8 Hypothetical chloroplast RF154.5e-1978.69Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS       H  KK  LMKDVNPLEN KYACRMKW LLSVTITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
SwissProt top hitse value%identityAlignment
Q06GT5 Putative uncharacterized protein ycf151.8e-1768.85Show/hide
Query:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLN       +H  K+  LMKDVN LEN K AC MKWFLLS  ITNHWFN
Subjt:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
Q09FP9 Putative uncharacterized protein ycf156.3e-1868.85Show/hide
Query:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLN       +H  KK  LMK VNPLEN KYAC MKW LLS  ITNHWF+
Subjt:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
Q0G9F8 Putative uncharacterized protein ycf156.9e-1767.21Show/hide
Query:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLN       +H  K+  LMK VNPLEN K AC MKW LLS  ITNHWFN
Subjt:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
Q0ZIV7 Putative uncharacterized protein ycf153.3e-1972.13Show/hide
Query:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWY+LPKQEFLNS       H  KK  LMKDVNPLEN KYAC MKW LLS  ITNHWFN
Subjt:  MYGWYELPKQEFLNS-------HCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
Q7Y6G9 Putative uncharacterized protein ycf156.9e-1767.21Show/hide
Query:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLN       +H  K+  LMK VNPLEN K AC MKW LLS  ITNHWFN
Subjt:  MYGWYELPKQEFLN-------SHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
Arabidopsis top hitse value%identityAlignment
ATCG00870.1 Protein precursor Ycf15, putative, chloroplast8.7e-1563.93Show/hide
Query:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS         +KK  L+KD NPLEN KYACR+K  LLSV ITN   N
Subjt:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
ATCG01270.1 Protein precursor Ycf15, putative, chloroplast8.7e-1563.93Show/hide
Query:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN
        MYGWYELPKQEFLNS         +KK  L+KD NPLEN KYACR+K  LLSV ITN   N
Subjt:  MYGWYELPKQEFLNSH-------CTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGATGGTATGAACTGCCTAAACAAGAATTCTTGAACAGTCACTGCACCAAAAAAATTTCATTAATGAAAGATGTAAATCCATTGGAAAATCCAAAATATGCATG
CCGGATGAAATGGTTCTTGCTATCTGTTACAATAACGAATCATTGGTTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGATGGTATGAACTGCCTAAACAAGAATTCTTGAACAGTCACTGCACCAAAAAAATTTCATTAATGAAAGATGTAAATCCATTGGAAAATCCAAAATATGCATG
CCGGATGAAATGGTTCTTGCTATCTGTTACAATAACGAATCATTGGTTTAACTGA
Protein sequenceShow/hide protein sequence
MYGWYELPKQEFLNSHCTKKISLMKDVNPLENPKYACRMKWFLLSVTITNHWFN