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PI0001312 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001312
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:19231081..19234210
RNA-Seq ExpressionPI0001312
SyntenyPI0001312
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057637.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.7e-2983.12Show/hide
Query:  STEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEV
        STEVVDVEEM+ MFLH+LAHD+KNRVI REF+RSGETISRHFN+VLLAV+ LHDELLKKPQPV N CTD RW+WFEV
Subjt:  STEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEV
KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]4.9e-2984.21Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEV
        TEV+DVEEMV MFLH+LAH +KNR+I REFVRSGET+SRHFNIVLLA   LHDELLKKPQPVTN+CTDPRWKWFEV
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEV
TYK08389.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.8e-3084Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I +EF RSGET+SRHFNIVLLA+L LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
XP_008441953.1 PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo]5.8e-3084Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I +EF RSGET+SRHFNIVLLA+L LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
XP_008455792.1 PREDICTED: putative nuclease HARBI1 [Cucumis melo]1.3e-2985.33Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I REFVRSGET+SRHFNIVLLA   LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
TrEMBL top hitse value%identityAlignment
A0A1S3B4J8 uncharacterized protein LOC1034859522.8e-3084Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I +EF RSGET+SRHFNIVLLA+L LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
A0A1S3C1U8 putative nuclease HARBI16.2e-3085.33Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I REFVRSGET+SRHFNIVLLA   LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
A0A5A7U0J9 Putative nuclease HARBI12.8e-3084Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I +EF RSGET+SRHFNIVLLA+L LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
A0A5A7USI0 Putative nuclease HARBI11.8e-2983.12Show/hide
Query:  STEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEV
        STEVVDVEEM+ MFLH+LAHD+KNRVI REF+RSGETISRHFN+VLLAV+ LHDELLKKPQPV N CTD RW+WFEV
Subjt:  STEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEV
A0A5D3CDG6 Putative nuclease HARBI12.8e-3084Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
        TEV+DVEEMV MFLH+LAHD+KNR+I +EF RSGET+SRHFNIVLLA+L LHDELLKKPQPVTN+CTDPRWKWFE
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)9.6e-0736.84Show/hide
Query:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACT----DPRWK
        T  + +E  + +FL ++ H+++ R +   F  SGETISRHFN VL AV+ +  +     QP +N+ T    DP +K
Subjt:  TEVVDVEEMVVMFLHVLAHDMKNRVIHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACT----DPRWK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGGATTTTGGCATTCGTTGCCAACTACCAGTTTCTTTGTTTGGTATCGGTAGAAAGACTTGTGTTCTGCGAGAAGATATTGTTGACTTCTGTAACATGCGAGA
AGTTAAGACTTTGACATTGGTGGCATATATGGTGTATTTGCATTCACAAGATGTTTCAAATTACATATCGGCTGGACACGACACCCAGGAAGCTAGAGCTCACAACAAAA
CCAACTCGTTCTGGCTCTTTTTAATCCAGGCGTCGACAGAAGTCGTCGACGTTGAGGAGATGGTCGTCATGTTCCTCCACGTACTCGCGCACGACATGAAGAATCGAGTG
ATCCATAGGGAGTTCGTGCGGTCGGGTGAGACAATTTCGCGACATTTCAACATAGTCTTGTTGGCAGTGCTATGCCTGCATGACGAGTTGTTGAAGAAACCTCAACCAGT
AACGAACGCGTGCACAGATCCCAGATGGAAGTGGTTTGAGGTACTTTATGAACGAAGAATAGTTGGACGCGTTTACCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGGATTTTGGCATTCGTTGCCAACTACCAGTTTCTTTGTTTGGTATCGGTAGAAAGACTTGTGTTCTGCGAGAAGATATTGTTGACTTCTGTAACATGCGAGA
AGTTAAGACTTTGACATTGGTGGCATATATGGTGTATTTGCATTCACAAGATGTTTCAAATTACATATCGGCTGGACACGACACCCAGGAAGCTAGAGCTCACAACAAAA
CCAACTCGTTCTGGCTCTTTTTAATCCAGGCGTCGACAGAAGTCGTCGACGTTGAGGAGATGGTCGTCATGTTCCTCCACGTACTCGCGCACGACATGAAGAATCGAGTG
ATCCATAGGGAGTTCGTGCGGTCGGGTGAGACAATTTCGCGACATTTCAACATAGTCTTGTTGGCAGTGCTATGCCTGCATGACGAGTTGTTGAAGAAACCTCAACCAGT
AACGAACGCGTGCACAGATCCCAGATGGAAGTGGTTTGAGGTACTTTATGAACGAAGAATAGTTGGACGCGTTTACCTTTAG
Protein sequenceShow/hide protein sequence
MEKDFGIRCQLPVSLFGIGRKTCVLREDIVDFCNMREVKTLTLVAYMVYLHSQDVSNYISAGHDTQEARAHNKTNSFWLFLIQASTEVVDVEEMVVMFLHVLAHDMKNRV
IHREFVRSGETISRHFNIVLLAVLCLHDELLKKPQPVTNACTDPRWKWFEVLYERRIVGRVYL