; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001321 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001321
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L33-like
Genome locationchr06:8562461..8563932
RNA-Seq ExpressionPI0001321
SyntenyPI0001321
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058825.1 50S ribosomal protein L33-like [Cucumis melo var. makuwa]4.3e-7291.88Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQF  +SSSSAPSNF+TFNSPSF A LSLTLSFVPNVKGLL +R LERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG R+DFKIVRLSSTARTGFFY KKKSRKM DKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

KAE8650541.1 hypothetical protein Csa_009952 [Cucumis sativus]1.4e-6786.88Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        M TTIQRFCLDLTLSCG RN F  DSSSS PSNF+TFNSPSFSA LSLTL+F+PN+KGLLS+R LERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG  +DFKIVRLSSTARTGFFY KKKSRK+ DKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

XP_008456021.1 PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo]4.3e-7291.88Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQF  +SSSSAPSNF+TFNSPSF A LSLTLSFVPNVKGLL +R LERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG R+DFKIVRLSSTARTGFFY KKKSRKM DKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

XP_031739425.1 uncharacterized protein LOC105434866 [Cucumis sativus]8.7e-6580.35Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKG-------------LLSRRTLERSIRYGSVICMAKRYAPDTTK
        M TTIQRFCLDLTLSCG RN F  DSSSS PSNF+TFNSPSFSA LSLTL+F+PN+KG             LLS+R LERSIRY SVICMAKRYAP+TTK
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKG-------------LLSRRTLERSIRYGSVICMAKRYAPDTTK

Query:  RKRLSRKRGGDPAKKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        RKRLSRKRGGDPAKKKKTRRKG  +DFKIVRLSSTARTGFFY KKKSRK+ DKIEVQKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPAKKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

XP_038880588.1 uncharacterized protein LOC120072240 [Benincasa hispida]2.0e-6182.5Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDL +SCGKRN+F  DS+SSA  N VTFNS SFSAALS  LS VPN+KG LS+R  ERSIRY SVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG ++DFKIVRLSSTARTGFFY KKKSRKM DK+E++KYDPIANRHVLF EVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

TrEMBL top hitse value%identityAlignment
A0A0A0LAF8 Uncharacterized protein4.2e-6580.35Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKG-------------LLSRRTLERSIRYGSVICMAKRYAPDTTK
        M TTIQRFCLDLTLSCG RN F  DSSSS PSNF+TFNSPSFSA LSLTL+F+PN+KG             LLS+R LERSIRY SVICMAKRYAP+TTK
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKG-------------LLSRRTLERSIRYGSVICMAKRYAPDTTK

Query:  RKRLSRKRGGDPAKKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        RKRLSRKRGGDPAKKKKTRRKG  +DFKIVRLSSTARTGFFY KKKSRK+ DKIEVQKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPAKKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

A0A1S3C284 uncharacterized protein LOC1034960732.1e-7291.88Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQF  +SSSSAPSNF+TFNSPSF A LSLTLSFVPNVKGLL +R LERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG R+DFKIVRLSSTARTGFFY KKKSRKM DKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

A0A5A7UZ21 50S ribosomal protein L33-like2.1e-7291.88Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MATTIQRFCLDLTLSCGKRNQF  +SSSSAPSNF+TFNSPSF A LSLTLSFVPNVKGLL +R LERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG R+DFKIVRLSSTARTGFFY KKKSRKM DKIEVQKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

A0A6J1E445 uncharacterized protein LOC111430611 isoform X11.3e-5374.21Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MA TI+R CLD  LSCG+RN+F  DS+SS P +FV+F   SFSAALS  LS VPNVK  LS+   ERSIR+GSVICMA+RYAP+ TKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEV
        KKKKTRRKG R+DFKI+RLSSTA TGFFY KKKSRKM DKIE+QK+DP+A RHVLFTEV
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEV

A0A6J1E4T6 uncharacterized protein LOC111430611 isoform X23.4e-5474.38Show/hide
Query:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA
        MA TI+R CLD  LSCG+RN+F  DS+SS P +FV+F   SFSAALS  LS VPNVK  LS+   ERSIR+GSVICMA+RYAP+ TKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPA

Query:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        KKKKTRRKG R+DFKI+RLSSTA TGFFY KKKSRKM DKIE+QK+DP+A RHVLFTEVK
Subjt:  KKKKTRRKGERRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

SwissProt top hitse value%identityAlignment
A1UT31 50S ribosomal protein L336.6e-0762.22Show/hide
Query:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        ++L STA TGFFY TKK SR MTDK+  +KYDPI  +HV F E K
Subjt:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

A7HWZ1 50S ribosomal protein L333.9e-0760Show/hide
Query:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        ++L STA TG+FY TKK SR MT+K+ ++KYDPIA +HV F E K
Subjt:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

B6IN38 50S ribosomal protein L331.3e-0756.52Show/hide
Query:  IVRLSSTARTGFFYTKKKS-RKMTDKIEVQKYDPIANRHVLFTEVK
        +++L S+A TGFFY KKK+ RK T+K+E +KYDP+A +HV+F E K
Subjt:  IVRLSSTARTGFFYTKKKS-RKMTDKIEVQKYDPIANRHVLFTEVK

Q11IM9 50S ribosomal protein L333.0e-0764.44Show/hide
Query:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        ++L STA TGFFY TKK SR MTDK+  +KYDPIA +HV F E K
Subjt:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

Q5FNN7 50S ribosomal protein L335.1e-0757.78Show/hide
Query:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK
        +RL S+A TG+FY TKK +R  T K+EV+KYDP+A +HV+F E K
Subjt:  VRLSSTARTGFFY-TKKKSRKMTDKIEVQKYDPIANRHVLFTEVK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein5.5e-0956.86Show/hide
Query:  RRDFKIVRLSSTARTGFFYTKKKSRK-MTDKIEVQKYDPIANRHVLFTEVK
        ++ F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  RRDFKIVRLSSTARTGFFYTKKKSRK-MTDKIEVQKYDPIANRHVLFTEVK

AT5G18790.1 Ribosomal protein L33 family protein5.5e-0956.86Show/hide
Query:  RRDFKIVRLSSTARTGFFYTKKKSRK-MTDKIEVQKYDPIANRHVLFTEVK
        ++ F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  RRDFKIVRLSSTARTGFFYTKKKSRK-MTDKIEVQKYDPIANRHVLFTEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAAAAAGGAATCAATTTTTCATTGATTCTTCGTCTTCAGCTCCTTCAAACTTCGTCACCTT
CAACTCTCCCTCCTTCTCTGCTGCCCTCTCGCTCACGCTCAGCTTCGTTCCCAATGTCAAAGGATTGTTGTCACGGAGGACTCTGGAGAGATCAATTCGCTATGGATCCG
TAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGAA
AGGAGAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTTTCTATACCAAGAAGAAAAGCAGGAAGATGACTGATAAGATTGAGGTCCAGAAATATGA
CCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
AGCAAACCGGTTATGAAGAGTATGAAAGAGAAGGAAGGGTTCTTTTTCATGGAAGAAGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGACGCTTTCTTGTGGAA
AAAGGAATCAATTTTTCATTGATTCTTCGTCTTCAGCTCCTTCAAACTTCGTCACCTTCAACTCTCCCTCCTTCTCTGCTGCCCTCTCGCTCACGCTCAGCTTCGTTCCC
AATGTCAAAGGATTGTTGTCACGGAGGACTCTGGAGAGATCAATTCGCTATGGATCCGTAATTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTT
GAGTAGGAAGAGGGGTGGTGATCCAGCCAAGAAAAAGAAGACAAGGAGGAAAGGGGAAAGGAGAGATTTCAAAATAGTCAGGCTCTCCTCAACTGCTAGGACTGGTTTTT
TCTATACCAAGAAGAAAAGCAGGAAGATGACTGATAAGATTGAGGTCCAGAAATATGACCCTATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGAGTCAGATTG
TTCTCTGTCATGGATATATACAAAAGATAGATAGATAGCTGGATGGATAGATAGATGGGTAAAACTTTGTTATTATTGAGTATGGATGCTTACTGGTTTCATGAAAACAC
TTCTTGCCTCACATTTTGTATCCAAAGCTGAAAGTTAGGAAAGATATTATCAAATGCCGAGTACATTGCCATGACCTTATTTGAATGAGATTTGTTCTATAGGTTTTACG
GTTGTCTTTGAATTCTAAGATCACTGAATACGCC
Protein sequenceShow/hide protein sequence
MATTIQRFCLDLTLSCGKRNQFFIDSSSSAPSNFVTFNSPSFSAALSLTLSFVPNVKGLLSRRTLERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPAKKKKTRRKGE
RRDFKIVRLSSTARTGFFYTKKKSRKMTDKIEVQKYDPIANRHVLFTEVK