CuGenDBv2

Gene ID	PI0001329
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr11:17317659..17318114
RNA-Seq Expression	PI0001329
Synteny	PI0001329
Gene Ontology terms	GO:0000723 - telomere maintenance (biological process) GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0043564 - Ku70:Ku80 complex (cellular component) GO:0003678 - DNA helicase activity (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function) GO:0042162 - telomeric DNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

8.8e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

4.3e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

A0A5A7V0Y9 Beta-galactosidase

4.3e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

A0A5A7VLQ7 Beta-galactosidase

4.3e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

A0A5D3BJK7 Beta-galactosidase

4.3e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

A0A5D3C4T4 Beta-galactosidase

4.3e-67

82.78

Show/hide

Query:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF
        +DVT+YFNKLSLLWQEMDL R+ VWDT NDS Q+AKLEEAD VYDFL GL+PKFD VCGRILGQRPL SLMEV +EVRLEEDRTNAM VLTTP  DSAAF
Subjt:  MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAF

Query:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK
        SARSSN D +KNNGK +P CEHCKKQWHTKDQCWKLHGRPP GKKRSSN+K
Subjt:  SARSSNLDHEKNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATGTCACGTCATATTTCAACAAACTTTCCCTATTGTGGCAAGAGATGGACTTGTATAGAGACATTGTTTGGGATACTTCTAATGACAGTTTACAGTTTGCCAAGCT
AGAAGAAGCGGACCATGTGTATGATTTTCTTGTCGGTCTCCATCCTAAGTTTGATATTGTTTGTGGTCGTATCCTTGGCCAGAGGCCTCTTTCGTCCCTGATGGAAGTCT
ACTATGAAGTCCGTCTTGAAGAAGATCGCACGAATGCCATGAGTGTCCTAACTACTCCTGCCACTGACTCTGCCGCCTTTAGTGCTCGTTCTTCCAACCTCGATCATGAG
AAAAACAATGGTAAACCAGTTCCCACCTGCGAGCACTGTAAGAAACAATGGCACACTAAAGATCAGTGTTGGAAGCTTCATGGGCGTCCTCCAAGAGGTAAGAAACGCTC
CTCCAATGACAAATAG

mRNA sequence

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Protein sequence

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MDVTSYFNKLSLLWQEMDLYRDIVWDTSNDSLQFAKLEEADHVYDFLVGLHPKFDIVCGRILGQRPLSSLMEVYYEVRLEEDRTNAMSVLTTPATDSAAFSARSSNLDHE
KNNGKPVPTCEHCKKQWHTKDQCWKLHGRPPRGKKRSSNDK

PI0001329 (gene) of Melon (PI 482460) v1 genome