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PI0001341 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001341
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr11:6773433..6774152
RNA-Seq ExpressionPI0001341
SyntenyPI0001341
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646961.1 hypothetical protein Csa_020907 [Cucumis sativus]4.0e-2769.23Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR RL ++STFNP VV R S DAGDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

XP_004143127.2 E3 ubiquitin-protein ligase RDUF1, partial [Cucumis sativus]4.0e-2769.23Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR RL ++STFNP VV R S DAGDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

XP_008464108.1 PREDICTED: E3 ubiquitin-protein ligase RING1 [Cucumis melo]1.2e-2668.38Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR R  ++STFNP VV R S DAGDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

XP_022986887.1 E3 ubiquitin-protein ligase RDUF2-like [Cucurbita maxima]6.4e-2568.47Show/hide
Query:  RSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVES--TIE
        RSR RL  ++TFNP VV R S D GDVVGGG+RN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NGLGRSENPP   AAVES  TIE
Subjt:  RSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVES--TIE

Query:  ILESHVDFDSH
        ILESHV  DSH
Subjt:  ILESHVDFDSH

XP_038902866.1 E3 ubiquitin-protein ligase RDUF1 [Benincasa hispida]1.2e-2668.38Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR RL ++STFNP VV R S D GDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

TrEMBL top hitse value%identityAlignment
A0A0A0KE74 RING-type E3 ubiquitin transferase1.9e-2769.23Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR RL ++STFNP VV R S DAGDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

A0A1S3CKQ2 RING-type E3 ubiquitin transferase5.6e-2768.38Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR R  ++STFNP VV R S DAGDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

A0A5A7V7N5 RING-type E3 ubiquitin transferase5.6e-2768.38Show/hide
Query:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE
        PR    RSR R  ++STFNP VV R S DAGDVVGGGERN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NG GRSENPP   AAVE
Subjt:  PRNLFSRSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVE

Query:  S--TIEILESHVDFDSH
        S  TIEILESHVD DSH
Subjt:  S--TIEILESHVDFDSH

A0A6J1FYT8 RING-type E3 ubiquitin transferase4.5e-2467.57Show/hide
Query:  RSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVES--TIE
        RSR RL  ++TFNP VV R S D GDVVGGG+RN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NGLGRSEN P   AAVES  TIE
Subjt:  RSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVES--TIE

Query:  ILESHVDFDSH
        ILESHV  DSH
Subjt:  ILESHVDFDSH

A0A6J1J8T8 RING-type E3 ubiquitin transferase3.1e-2568.47Show/hide
Query:  RSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVES--TIE
        RSR RL  ++TFNP VV R S D GDVVGGG+RN+FD Y   GAGSGL PV  TMSEF M T FDRLL +Q  Q+E+NGLGRSENPP   AAVES  TIE
Subjt:  RSRMRLENQSTFNP-VVFRDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPP---AAVES--TIE

Query:  ILESHVDFDSH
        ILESHV  DSH
Subjt:  ILESHVDFDSH

SwissProt top hitse value%identityAlignment
O22283 Probable E3 ubiquitin-protein ligase RHC2A3.8e-0440Show/hide
Query:  NQSTFNPVVFRDSVDA--GDVVGGG-ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMN---GLGRSENPPA---AVES--TIEIL
        N+S    +V R S  A   DVV  G +R+ F  Y   G  SGL P+  +M+EF + + FDRLL  Q  Q+E+N    L   E+PPA   A+E+   IEI 
Subjt:  NQSTFNPVVFRDSVDA--GDVVGGG-ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMN---GLGRSENPPA---AVES--TIEIL

Query:  ESHVDFDSHS
         +H+  DS S
Subjt:  ESHVDFDSHS

Q940T5 E3 ubiquitin-protein ligase RDUF24.0e-0634.48Show/hide
Query:  RMRLENQSTFNPVVF-------RDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWR-QVEMNGLGRSENPPA---AVES
        R R   + +FNPV+        R+  + GD     +R  F+ Y   G+GSGL P+  ++SE  M + F+RLL+Q  + +    G+GRS NPPA   A+ES
Subjt:  RMRLENQSTFNPVVF-------RDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWR-QVEMNGLGRSENPPA---AVES

Query:  --TIEILESHVDFDSH
           +EI + H+  +++
Subjt:  --TIEILESHVDFDSH

Q9SNB6 E3 ubiquitin-protein ligase RDUF16.9e-0635.83Show/hide
Query:  RMRLENQSTFNPVVFRDSVDAG-------DVVGGG---ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEM--NGLGRSENPPA---
        R R   +++FNPV+       G       +  G G   ER  ++ Y   G+GSGL P+  ++SE  M + F+RLL +Q  Q+E   NG+GRS NPPA   
Subjt:  RMRLENQSTFNPVVFRDSVDAG-------DVVGGG---ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEM--NGLGRSENPPA---

Query:  AVES--TIEILESHVDFDSH
        A+ES   +EI + H   +++
Subjt:  AVES--TIEILESHVDFDSH

Arabidopsis top hitse value%identityAlignment
AT2G39720.1 RING-H2 finger C2A2.7e-0540Show/hide
Query:  NQSTFNPVVFRDSVDA--GDVVGGG-ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMN---GLGRSENPPA---AVES--TIEIL
        N+S    +V R S  A   DVV  G +R+ F  Y   G  SGL P+  +M+EF + + FDRLL  Q  Q+E+N    L   E+PPA   A+E+   IEI 
Subjt:  NQSTFNPVVFRDSVDA--GDVVGGG-ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEMN---GLGRSENPPA---AVES--TIEIL

Query:  ESHVDFDSHS
         +H+  DS S
Subjt:  ESHVDFDSHS

AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein4.9e-0735.83Show/hide
Query:  RMRLENQSTFNPVVFRDSVDAG-------DVVGGG---ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEM--NGLGRSENPPA---
        R R   +++FNPV+       G       +  G G   ER  ++ Y   G+GSGL P+  ++SE  M + F+RLL +Q  Q+E   NG+GRS NPPA   
Subjt:  RMRLENQSTFNPVVFRDSVDAG-------DVVGGG---ERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWRQVEM--NGLGRSENPPA---

Query:  AVES--TIEILESHVDFDSH
        A+ES   +EI + H   +++
Subjt:  AVES--TIEILESHVDFDSH

AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein2.9e-0734.48Show/hide
Query:  RMRLENQSTFNPVVF-------RDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWR-QVEMNGLGRSENPPA---AVES
        R R   + +FNPV+        R+  + GD     +R  F+ Y   G+GSGL P+  ++SE  M + F+RLL+Q  + +    G+GRS NPPA   A+ES
Subjt:  RMRLENQSTFNPVVF-------RDSVDAGDVVGGGERNNFDNY---GAGSGLWPVSVTMSEFFMRTVFDRLLQQQWR-QVEMNGLGRSENPPA---AVES

Query:  --TIEILESHVDFDSH
           +EI + H+  +++
Subjt:  --TIEILESHVDFDSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCACGTGGCCACACTCGTGTGAAACGCTCAAATCTGAGGCTATGTCTACCCAAAAGGCGTCCTATTGGTGTTACTGCTGCAGCCGTCACGTTTGTATTTGGGCT
CAGGACTCCGTCACTTGTCCTTACTGTGACTGGTTTTGTACAACCTATTGAAATTTCTCTTCAGCCGCGCAATCTCTTCAGTCGTAGTCGTATGAGACTTGAGAATCAGT
CGACTTTTAACCCTGTTGTTTTTCGTGATTCTGTTGATGCGGGGGATGTGGTTGGCGGTGGGGAAAGGAATAACTTTGATAATTATGGTGCTGGGTCTGGGCTTTGGCCA
GTTTCGGTGACCATGTCTGAGTTTTTTATGAGGACTGTGTTCGATAGGTTGCTGCAGCAGCAGTGGCGTCAAGTGGAGATGAACGGGCTTGGTAGATCTGAAAATCCGCC
GGCTGCTGTGGAATCAACGATTGAGATTTTAGAAAGTCATGTGGATTTTGATTCTCACTCCGATCGCAAATCCTTAAATTTACACTTCTACTTCGGTTTATTTTTTCTTT
TTTTAGTGTTCCTGCCCTCGTCTTTGTACCTAATATATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCACGTGGCCACACTCGTGTGAAACGCTCAAATCTGAGGCTATGTCTACCCAAAAGGCGTCCTATTGGTGTTACTGCTGCAGCCGTCACGTTTGTATTTGGGCT
CAGGACTCCGTCACTTGTCCTTACTGTGACTGGTTTTGTACAACCTATTGAAATTTCTCTTCAGCCGCGCAATCTCTTCAGTCGTAGTCGTATGAGACTTGAGAATCAGT
CGACTTTTAACCCTGTTGTTTTTCGTGATTCTGTTGATGCGGGGGATGTGGTTGGCGGTGGGGAAAGGAATAACTTTGATAATTATGGTGCTGGGTCTGGGCTTTGGCCA
GTTTCGGTGACCATGTCTGAGTTTTTTATGAGGACTGTGTTCGATAGGTTGCTGCAGCAGCAGTGGCGTCAAGTGGAGATGAACGGGCTTGGTAGATCTGAAAATCCGCC
GGCTGCTGTGGAATCAACGATTGAGATTTTAGAAAGTCATGTGGATTTTGATTCTCACTCCGATCGCAAATCCTTAAATTTACACTTCTACTTCGGTTTATTTTTTCTTT
TTTTAGTGTTCCTGCCCTCGTCTTTGTACCTAATATATTTTTAA
Protein sequenceShow/hide protein sequence
MKARGHTRVKRSNLRLCLPKRRPIGVTAAAVTFVFGLRTPSLVLTVTGFVQPIEISLQPRNLFSRSRMRLENQSTFNPVVFRDSVDAGDVVGGGERNNFDNYGAGSGLWP
VSVTMSEFFMRTVFDRLLQQQWRQVEMNGLGRSENPPAAVESTIEILESHVDFDSHSDRKSLNLHFYFGLFFLFLVFLPSSLYLIYF