CuGenDBv2

Gene ID	PI0001352
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Genome location	chr02:6865595..6867051
RNA-Seq Expression	PI0001352
Synteny	PI0001352
Gene Ontology terms	GO:0009791 - post-embryonic development (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR003656 - Zinc finger, BED-type IPR036236 - Zinc finger C2H2 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031947.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

2.8e-43

86.92

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNN T  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

KAA0065439.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

9.5e-44

87.85

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNNAT  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

KAA0067548.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

9.5e-44

87.85

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNNAT  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

TYK08901.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

9.5e-44

87.85

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNNAT  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

TYK16769.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]

2.8e-43

86.92

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNN T  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SRD2 Zinc finger BED domain-containing protein RICESLEEPER 2-like

1.3e-43

86.92

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNN T  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

A0A5A7VIJ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like

4.6e-44

87.85

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Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNNAT  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

A0A5D3C9B8 Zinc finger BED domain-containing protein RICESLEEPER 2-like

4.6e-44

87.85

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Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNNAT  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

A0A5D3CAM1 Zinc finger BED domain-containing protein RICESLEEPER 2-like

4.6e-44

87.85

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNNAT  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

A0A5D3D2K8 Zinc finger BED domain-containing protein RICESLEEPER 2-like

1.3e-43

86.92

Show/hide

Query:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
        ME+SSGQ+SET  SPSLSPSP+PSTNN T  VSSSK PLP KK+ RATKKTTST+WDHFTKLE+NSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK
Subjt:  MESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHLKNQCKK

Query:  YPYKEVE
        YPYKEVE
Subjt:  YPYKEVE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTTACTGAGTATGTTACACCCCCTCCTAAACCACCTACTTTTTGCCCGAGAGACGGCATGAAGCCAACAGATACCGTTGCAATCTCAACTCTTTCCTCTTCTCAGTT
TCTTCTCATTCGACACTCAACTTCTCTCACGTTCGGCTTCAGTTCATCTTCACGGCAAGCGATAGTGTCAACTTCTCACCATCACGCTGTCGCCGGCTTCACCTTCACCT
TCACGCCGTCGCATCTCATCTCTCTCTCAAGTCTCATATCCGCTCGTCTAAGCTCTCTCTCACGTCTCATCGTCAGTCTCCCTCTTAGGTCTCATCGCTGCCACCGTCGG
CTCGTTTCTCCATCTCAAGTCTCATTTGGGTTGACAAAGATTTGGAATATGGAGAGCAGTAGTGGACAATATAGTGAAACTAGCCCTAGCCCTAGTCTTAGTCCTAGTCC
TTCTCCTTCCACTAATAACGCAACGAAAATTGTGAGTTCGAGTAAACAACCACTACCCTATAAAAAGAGAACTAGAGCCACTAAGAAGACAACTTCCACTATATGGGATC
ACTTCACAAAGTTGGAAAAGAATAGTTCTAGGTGCACATGCAATTATTGTGATAAAGAGTATTGTTGTGATACTACCTCATGTGGAACTAGCACGTTATGGAAGCACTTA
AAAAATCAGTGTAAGAAGTACCCATATAAGGAAGTAGAAACATGA

mRNA sequence

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Protein sequence

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MVTEYVTPPPKPPTFCPRDGMKPTDTVAISTLSSSQFLLIRHSTSLTFGFSSSSRQAIVSTSHHHAVAGFTFTFTPSHLISLSSLISARLSSLSRLIVSLPLRSHRCHRR
LVSPSQVSFGLTKIWNMESSSGQYSETSPSPSLSPSPSPSTNNATKIVSSSKQPLPYKKRTRATKKTTSTIWDHFTKLEKNSSRCTCNYCDKEYCCDTTSCGTSTLWKHL
KNQCKKYPYKEVET

PI0001352 (gene) of Melon (PI 482460) v1 genome