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PI0001385 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001385
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionER membrane protein complex subunit 6
Genome locationchr02:762933..768828
RNA-Seq ExpressionPI0001385
SyntenyPI0001385
Gene Ontology termsGO:0000045 - autophagosome assembly (biological process)
GO:0072546 - ER membrane protein complex (cellular component)
InterPro domainsIPR008504 - ER membrane protein complex subunit 6
IPR029008 - Rab5-interacting protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597582.1 ER membrane protein complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4581.25Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

XP_004135605.1 ER membrane protein complex subunit 6 [Cucumis sativus]1.0e-4885.16Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITS+ALAAKAGFSFHSYFESCNQIL DGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

XP_008450632.1 PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo]1.6e-4986.72Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITS+ALAAKAGFSFHSYFESCNQILLDGFL 
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

XP_022137968.1 ER membrane protein complex subunit 6 [Momordica charantia]1.4e-4581.25Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSS AS+KKS+++ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFI YFLVMAITSL LAAKAGFSFHSYFES NQILLDGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

XP_022937062.1 ER membrane protein complex subunit 6 [Cucurbita moschata]4.0e-4581.25Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

TrEMBL top hitse value%identityAlignment
A0A0A0LZ06 ER membrane protein complex subunit 62.9e-5771.51Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTGFIFYFLVMAITS+ALAAKAGFSFHSYFESCNQIL DGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIHNTCLFHEFATSLLLLIHPTVEISPNGINKLVRH-LTIAISLYITSHHSAISLLLCKPF
        GLMSFVLFWT                    C F     S           SPN  NKLVR  +T    LYITSH S +SLLLCKPF
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIHNTCLFHEFATSLLLLIHPTVEISPNGINKLVRH-LTIAISLYITSHHSAISLLLCKPF

A0A1S3BQB0 ER membrane protein complex subunit 67.7e-5086.72Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITS+ALAAKAGFSFHSYFESCNQILLDGFL 
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

A0A6J1CBS9 ER membrane protein complex subunit 66.7e-4681.25Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSS AS+KKS+++ADD+PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFI YFLVMAITSL LAAKAGFSFHSYFES NQILLDGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

A0A6J1FFH8 ER membrane protein complex subunit 62.0e-4581.25Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSS AS+KKSSD+ DDIPI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

A0A6J1I7D9 ER membrane protein complex subunit 63.3e-4580.47Show/hide
Query:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS
        MAGYSS AS+KKSSD+ DD+PI NAENLQNNLKIIYYSRTFLSIIGGVIAGILGFT LTGFIFYFLVMAITS+ LAAKAGFSFHSYFES NQILLDGFLS
Subjt:  MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLS

Query:  GLMSFVLFWTSMTFGITCHTSFLFDLIH
        GLMSFVLFWT           F +D++H
Subjt:  GLMSFVLFWTSMTFGITCHTSFLFDLIH

SwissProt top hitse value%identityAlignment
Q3ZCG8 ER membrane protein complex subunit 68.8e-1137.04Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHT
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KA   ++ YF+S   +   G + GL ++VLFWT          
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHT

Query:  SFLFDLIH
         FL+ ++H
Subjt:  SFLFDLIH

Q68EU8 ER membrane protein complex subunit 66.7e-1138.61Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHTSFLFDLI
        ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + SL L  K+G  ++ YF+S   +   G + GL ++VLFWT           FL+ ++
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHTSFLFDLI

Query:  H
        H
Subjt:  H

Q6GLC5 ER membrane protein complex subunit 65.2e-1138.61Show/hide
Query:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHTSFLFDLI
        ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + SL L  K+G  ++ YF+S   +   G + GL ++VLFWT           FL+ ++
Subjt:  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHTSFLFDLI

Query:  H
        H
Subjt:  H

Q9BV81 ER membrane protein complex subunit 68.0e-1237.96Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHT
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KAG  ++ YF+S   +   G + GL ++VLFWT          
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHT

Query:  SFLFDLIH
         FL+ ++H
Subjt:  SFLFDLIH

Q9CQW0 ER membrane protein complex subunit 68.0e-1237.96Show/hide
Query:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHT
        P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + SL L  KAG  ++ YF+S   +   G + GL ++VLFWT          
Subjt:  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWTSMTFGITCHT

Query:  SFLFDLIH
         FL+ ++H
Subjt:  SFLFDLIH

Arabidopsis top hitse value%identityAlignment
AT5G49540.1 Rab5-interacting family protein3.8e-3361.98Show/hide
Query:  ASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVL
        +S+K+S D   DIP F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+FYF+VM ITS+ L AKAGFS   YF+S N++L DGFL GLMSFVL
Subjt:  ASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVL

Query:  FWTSMTFGITCHTSFLFDLIH
        FWT           F +DL+H
Subjt:  FWTSMTFGITCHTSFLFDLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTA
CAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTG
CACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGAGTGGACTTATGTCGTTCGTGCTTTTCTGGACC
TCCATGACTTTTGGCATCACGTGCCATACCTCATTTTTATTTGATCTTATCCACAATACGTGCCTATTCCATGAATTTGCCACGTCACTACTCCTTCTCATCCATCCAAC
GGTCGAGATTTCTCCTAATGGTATTAACAAACTTGTTCGACATTTAACCATCGCCATTTCTCTTTATATAACTTCACACCATTCCGCTATCTCCCTTCTTCTCTGTAAAC
CCTTCATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTA
CAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCACTTG
CACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGAGTGGACTTATGTCGTTCGTGCTTTTCTGGACC
TCCATGACTTTTGGCATCACGTGCCATACCTCATTTTTATTTGATCTTATCCACAATACGTGCCTATTCCATGAATTTGCCACGTCACTACTCCTTCTCATCCATCCAAC
GGTCGAGATTTCTCCTAATGGTATTAACAAACTTGTTCGACATTTAACCATCGCCATTTCTCTTTATATAACTTCACACCATTCCGCTATCTCCCTTCTTCTCTGTAAAC
CCTTCATTCATTGA
Protein sequenceShow/hide protein sequence
MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSLALAAKAGFSFHSYFESCNQILLDGFLSGLMSFVLFWT
SMTFGITCHTSFLFDLIHNTCLFHEFATSLLLLIHPTVEISPNGINKLVRHLTIAISLYITSHHSAISLLLCKPFIH