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PI0001389 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001389
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:12871366..12871659
RNA-Seq ExpressionPI0001389
SyntenyPI0001389
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045496.1 uncharacterized protein E6C27_scaffold1202G00410 [Cucumis melo var. makuwa]4.3e-1460.29Show/hide
Query:  MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAE
        MTV EYEKKFT+LAKY I FI+DEE+K K FEGGL+      VTVS +W D+ K+++AA+R+E+CLA+
Subjt:  MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAE

KAA0054739.1 uncharacterized protein E6C27_scaffold437G00090 [Cucumis melo var. makuwa]1.9e-1455.91Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE
        TV  YEKKFT+L KY I FILDEE KCK F+  L+T     VT S  W D+SK+VEA I  EKCLAE   EK LKE KSS    + KE+ G +
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE

TYJ96210.1 uncharacterized protein E5676_scaffold261G00500 [Cucumis melo var. makuwa]1.2e-1358.82Show/hide
Query:  MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAE
        MTV EYEKKFT+LAKY I FI+DEE+K K FEGGL+       TVS +W D+ K+++AA+R+E+CLA+
Subjt:  MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAE

TYJ99705.1 uncharacterized protein E5676_scaffold562G001040 [Cucumis melo var. makuwa]1.1e-1455.91Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE
        TV  YEKKFT+L KY I FILDEE KCK F+  L+T     VT S  W D+SK+VEA I  EKCLAE   EK LKE KSS    + KE+ G +
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE

TYK02484.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-1354.74Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSS---ETSKEKEESGE
        TV EY KKF +LA+Y I FI++EEDKC HFE GL+T     VT     LD+SK+VEAAIR+EKCL EE  EK + EG+ SS   +  +EKE++ E
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSS---ETSKEKEESGE

TrEMBL top hitse value%identityAlignment
A0A5A7TP59 Zf-CCHC domain-containing protein1.3e-1354.74Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSS---ETSKEKEESGE
        TV EY KKF +LA+Y I FI++EEDKC HFE GL+T     VT     LD+SK+VEAAIR+EKCL EE  EK + EG+ SS   +  +EKE++ E
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSS---ETSKEKEESGE

A0A5A7UMQ3 Uncharacterized protein9.2e-1555.91Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE
        TV  YEKKFT+L KY I FILDEE KCK F+  L+T     VT S  W D+SK+VEA I  EKCLAE   EK LKE KSS    + KE+ G +
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE

A0A5D3BN18 Uncharacterized protein5.4e-1555.91Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE
        TV  YEKKFT+L KY I FILDEE KCK F+  L+T     VT S  W D+SK+VEA I  EKCLAE   EK LKE KSS    + KE+ G +
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEE

A0A5D3BTI8 Retrotransposon gag protein6.0e-1454.74Show/hide
Query:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSS---ETSKEKEESGE
        TV EY KKF +LA+Y I FI++EEDKC HFE GL+T     VT     LD+SK+VEAAIR+EKCL EE  EK + EG+ SS   +  +EKE++ E
Subjt:  TVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSS---ETSKEKEESGE

A0A5D3CT88 Zf-CCHC domain-containing protein1.0e-1354.79Show/hide
Query:  MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEK
        M V EYEKKF +LAKY +AF++DE DKC  FE GL  +    V VS++WLD+SK+VEA +R+++CLAE +  K
Subjt:  MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTCATAGAATATGAAAAGAAGTTCACTAAGCTAGCGAAGTACGGGATAGCCTTTATATTGGATGAGGAGGATAAGTGTAAGCATTTTGAAGGAGGTTTAAAGAC
GAAATTTTGGATGCCAGTGACAGTGAGTACGCATTGGTTGGATTACTCTAAAATGGTAGAGGCGGCCATACGAGTTGAGAAGTGTTTGGCTGAAGAGAAAGGCGAGAAAA
GTTTGAAGGAAGGAAAGTCAAGTTCGGAGACGAGTAAAGAAAAAGAGGAAAGTGGTGAGGAAGCAAGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTCATAGAATATGAAAAGAAGTTCACTAAGCTAGCGAAGTACGGGATAGCCTTTATATTGGATGAGGAGGATAAGTGTAAGCATTTTGAAGGAGGTTTAAAGAC
GAAATTTTGGATGCCAGTGACAGTGAGTACGCATTGGTTGGATTACTCTAAAATGGTAGAGGCGGCCATACGAGTTGAGAAGTGTTTGGCTGAAGAGAAAGGCGAGAAAA
GTTTGAAGGAAGGAAAGTCAAGTTCGGAGACGAGTAAAGAAAAAGAGGAAAGTGGTGAGGAAGCAAGCAAGTGA
Protein sequenceShow/hide protein sequence
MTVIEYEKKFTKLAKYGIAFILDEEDKCKHFEGGLKTKFWMPVTVSTHWLDYSKMVEAAIRVEKCLAEEKGEKSLKEGKSSSETSKEKEESGEEASK